RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ZSCAN5CA6NGD5 496 aaPredicted RBP11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 K7ERI5 159 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 CD58P19256 250 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 GUCY2FP51841 1108 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 TRAPPC11Q7Z392 1133 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 RHPN2Q8IUC4 686 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 TAS1R2Q8TE23 839 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 BTBD6Q96KE9 485 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 MMP19Q99542 508 aa11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 DDX41Q9UJV9 622 aaKnown RBP11.02□□□□□ -0.64
RBFOX1-202ENST00000340209 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 SASH3O75995 380 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 BCRP11274 1271 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 RPS6KA1Q15418 735 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 C8orf74Q6P047 294 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 C4orf19Q8IY42 314 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 ANKRD13AQ8IZ07 590 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 GPRASP2Q96D09 838 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 SPATA33Q96N06 139 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 PORCNQ9H237 461 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 RABEP2Q9H5N1 569 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 RNF19AQ9NV58 838 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 APEX2Q9UBZ4 518 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 NAGPAQ9UK23 515 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 SNX12Q9UMY4 172 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 KRT19P08727 400 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 SOX5P35711 763 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 STAT5BP51692 787 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 GALCP54803 685 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 MESDQ14696 234 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 ZBTB41Q5SVQ8 909 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 INTS8Q75QN2 995 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 RPUSD2Q8IZ73 545 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 PLEKHO2Q8TD55 490 aa11.02□□□□□ -0.65
RBFOX1-202ENST00000340209 F8VZ95 297 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 SUPT20HL2P0C7V6 817 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TMEM62Q0P6H9 643 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 RSRC2Q7L4I2 434 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 ASAP3Q8TDY4 903 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 FECHP22830 423 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 PIK3CAP42336 1068 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 CLCN3P51790 818 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TMEM161BQ8NDZ6 487 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TATDN2Q93075 761 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 CDHR1Q96JP9 859 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 MSTO1Q9BUK6 570 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 RBM12Q9NTZ6 932 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 FBXO40Q9UH90 709 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 DDX3XO00571 662 aaKnown RBP eCLIP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 SGPL1O95470 568 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TXNP10599 105 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 SND1Q7KZF4 910 aaKnown RBP eCLIP11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 IRF2BP2Q7Z5L9 587 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TMEM130Q8N3G9 435 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TXLNBQ8N3L3 684 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 RNF149Q8NC42 400 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 REPS2Q8NFH8 660 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 TMEM117Q9H0C3 514 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 XPNPEP1Q9NQW7 623 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 ZNF112Q9UJU3 913 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 IVNS1ABPQ9Y6Y0 642 aa11.01□□□□□ -0.65
RBFOX1-202ENST00000340209 N4BP1O75113 896 aaKnown RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 EIF3JO75822 258 aaKnown RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 ARIH2O95376 493 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 FERP16591 822 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 ADSSP30520 456 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 AMPD2Q01433 879 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 ARMC9Q7Z3E5 817 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 ERO1BQ86YB8 467 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 IQCDQ96DY2 449 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 THAP2Q9H0W7 228 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 VPS18Q9P253 973 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 SSU72P8A0A1W2PR75 194 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 DGAT1O75907 488 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 OATP04181 439 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 ZNF131P52739 623 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 BMT2Q1RMZ1 405 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 LLGL2Q6P1M3 1020 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 SLC47A2Q86VL8 602 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 TLR10Q9BXR5 811 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 TFAMQ00059 246 aaKnown RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 GUCY2DQ02846 1103 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 XKR3Q5GH77 459 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 LBX2Q6XYB7 198 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 LNX1Q8TBB1 728 aaPredicted RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 SEMA4DQ92854 862 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 ARHGEF26Q96DR7 871 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms