RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ALDH1A1P00352 501 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 PIGRP01833 764 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 HNRNPH3P31942 346 aaKnown RBP23.13■■□□□ 1.29
VRK2-201ENST00000340157 ABCD1P33897 745 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 PSMC4P43686 418 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 FMO5P49326 533 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 CLCN3P51790 818 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 IGBP1P78318 339 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 LACTBP83111 547 aaPredicted RBP23.13■■□□□ 1.29
VRK2-201ENST00000340157 EFCAB12Q6NXP0 572 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 INTS8Q75QN2 995 aaKnown RBP23.13■■□□□ 1.29
VRK2-201ENST00000340157 EXOC8Q8IYI6 725 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 LINC01465Q8N7H1 131 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 EDEM3Q9BZQ6 932 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 HAPLN2Q9GZV7 340 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 CCDC113Q9H0I3 377 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 TMEM134Q9H6X4 195 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 SIX2Q9NPC8 291 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 CEP72Q9P209 647 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 SUCLA2Q9P2R7 463 aaPredicted RBP23.13■■□□□ 1.29
VRK2-201ENST00000340157 GABRQQ9UN88 632 aa23.13■■□□□ 1.29
VRK2-201ENST00000340157 A6NJR5 290 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 K7ERI5 159 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 SCP2P22307 547 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 SNRNP35Q16560 246 aaKnown RBP23.12■■□□□ 1.29
VRK2-201ENST00000340157 DGKDQ16760 1214 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 EXOC3L4Q17RC7 722 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 DEFB115Q30KQ5 88 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 TLK2Q86UE8 772 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 POMGNT1Q8WZA1 660 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 BICD1Q96G01 975 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 PLCB1Q9NQ66 1216 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 PLAGL2Q9UPG8 496 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 STYXL1Q9Y6J8 313 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 PHLPP2Q6ZVD8 1323 aa23.12■■□□□ 1.29
VRK2-201ENST00000340157 LRRC53A6NM62 1247 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 TTLL13PA6NNM8 815 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 GARTP22102 1010 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 VAMP7P51809 220 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 STRN3Q13033 797 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 MXD4Q14582 209 aaPredicted RBP23.11■■□□□ 1.29
VRK2-201ENST00000340157 PDXDC1Q6P996 788 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 ZNF397Q8NF99 534 aaPredicted RBP23.11■■□□□ 1.29
VRK2-201ENST00000340157 JPH2Q9BR39 696 aaPredicted RBP23.11■■□□□ 1.29
VRK2-201ENST00000340157 NLRC4Q9NPP4 1024 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 GCNT4Q9P109 453 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 ZNF215Q9UL58 517 aaPredicted RBP23.11■■□□□ 1.29
VRK2-201ENST00000340157 ADGRG1Q9Y653 693 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 SRGAP2CP0DJJ0 459 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 KLRC1P26715 233 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 FCGRTP55899 365 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 POLR2FP61218 127 aaKnown RBP23.11■■□□□ 1.29
VRK2-201ENST00000340157 PPP3CAQ08209 521 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 GBP6Q6ZN66 633 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 RRAGAQ7L523 313 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 RNF149Q8NC42 400 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 TRPV1Q8NER1 839 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 CREBZFQ9NS37 354 aa23.11■■□□□ 1.29
VRK2-201ENST00000340157 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 COL1A2P08123 1366 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 KRT13P13646 458 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 LIG4P49917 911 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 RHPN2Q8IUC4 686 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 METTL13Q8N6R0 699 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 ZBTB45Q96K62 511 aaPredicted RBP23.1■■□□□ 1.29
VRK2-201ENST00000340157 TARS2Q9BW92 718 aaKnown RBP23.1■■□□□ 1.29
VRK2-201ENST00000340157 AJAP1Q9UKB5 411 aaPredicted RBP23.1■■□□□ 1.29
VRK2-201ENST00000340157 HTTP42858 3142 aa23.1■■□□□ 1.29
VRK2-201ENST00000340157 MSCO60682 206 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 MARCH8Q5T0T0 291 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 KLHDC7AQ5VTJ3 777 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 GPIHBP1Q8IV16 184 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 KAT2BQ92831 832 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 ZNF668Q96K58 619 aaPredicted RBP23.09■■□□□ 1.29
VRK2-201ENST00000340157 A0A0U1RQJ8 604 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 CDK17Q00537 523 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 TRIM65Q6PJ69 517 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 CACNA2D4Q7Z3S7 1137 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 ACRBPQ8NEB7 543 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 ATRIPQ8WXE1 791 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 TRIB2Q92519 343 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 MFSD14AQ96MC6 490 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 FHOD1Q9Y613 1164 aa23.09■■□□□ 1.29
VRK2-201ENST00000340157 TBC1D8O95759 1140 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 F2P00734 622 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 PLEKP08567 350 aaPredicted RBP23.08■■□□□ 1.29
VRK2-201ENST00000340157 UCHL3P15374 230 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 EFNA5P52803 228 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 MYL7Q01449 175 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 MTHFD1LQ6UB35 978 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 GPD1LQ8N335 351 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 ARHGAP20Q9P2F6 1191 aa23.08■■□□□ 1.29
VRK2-201ENST00000340157 REXO2Q9Y3B8 237 aaKnown RBP23.08■■□□□ 1.29
VRK2-201ENST00000340157 FLT3LGP49771 235 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 CYP24A1Q07973 514 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 PPFIA1Q13136 1202 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 GRIK4Q16099 956 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 TSR1Q2NL82 804 aaKnown RBP23.07■■□□□ 1.28
VRK2-201ENST00000340157 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.07■■□□□ 1.28
VRK2-201ENST00000340157 LMO3Q8TAP4 145 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms