RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SFPQP23246 707 aaKnown RBP eCLIP19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 KCNA1Q09470 495 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 AMHR2Q16671 573 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 KNOP1Q1ED39 458 aaKnown RBP19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 FBXO47Q5MNV8 452 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 LRSAM1Q6UWE0 723 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 HTATIP2Q9BUP3 242 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 ALPK3Q96L96 1907 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 BRCA2P51587 3418 aa19.64■□□□□ 0.73
SDCBP2-201ENST00000339987 PARNO95453 639 aaKnown RBP19.63■□□□□ 0.73
SDCBP2-201ENST00000339987 NELFCDQ8IXH7 590 aa19.63■□□□□ 0.73
SDCBP2-201ENST00000339987 MRPL4Q9BYD3 311 aaKnown RBP19.63■□□□□ 0.73
SDCBP2-201ENST00000339987 KCTD10Q9H3F6 313 aa19.63■□□□□ 0.73
SDCBP2-201ENST00000339987 ZMYM2Q9UBW7 1377 aa19.63■□□□□ 0.73
SDCBP2-201ENST00000339987 TANC1Q9C0D5 1861 aa19.63■□□□□ 0.73
SDCBP2-201ENST00000339987 CSDE1O75534 798 aaKnown RBP19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 ERLIN2O94905 339 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 SNRPFP62306 86 aaKnown RBP19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 LPIN1Q14693 890 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 CENPPQ6IPU0 288 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 FOXR2Q6PJQ5 311 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 ZPBP2Q6X784 338 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 TSHZ1Q6ZSZ6 1077 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 FAM228AQ86W67 206 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 SYCP3Q8IZU3 236 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 GBP3Q9H0R5 595 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 CNTNAP2Q9UHC6 1331 aa19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 NOC2LQ9Y3T9 749 aaKnown RBP19.62■□□□□ 0.73
SDCBP2-201ENST00000339987 UMODL1Q5DID0 1318 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 PDXKO00764 312 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 TSPAN1O60635 241 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 RPS6KA5O75582 802 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 CAVIN2O95810 425 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 EDN1P05305 212 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 CCNE1P24864 410 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 ERCC5P28715 1186 aaPredicted RBP19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 AXLP30530 894 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 PAK1Q13153 545 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 PRPF4BQ13523 1007 aaKnown RBP19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 MBTPS1Q14703 1052 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 ANO6Q4KMQ2 910 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 ZCWPW2Q504Y3 356 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 FAM43BQ6ZT52 329 aaPredicted RBP19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 C11orf57Q6ZUT1 292 aaPredicted RBP19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 CATSPER4Q7RTX7 472 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 GOLGA5Q8TBA6 731 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 NELFBQ8WX92 580 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 P2RX5Q93086 422 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 WNT8AQ9H1J5 351 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 DNAJC25Q9H1X3 360 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 SEMA6BQ9H3T3 888 aa19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 TYW1Q9NV66 732 aaKnown RBP19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 CGNQ9P2M7 1197 aaKnown RBP19.61■□□□□ 0.73
SDCBP2-201ENST00000339987 GPR182O15218 404 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 TGFB1I1O43294 461 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 GHRP10912 638 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 FGFR4P22455 802 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 KLHL10Q6JEL2 608 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 HS2ST1Q7LGA3 356 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 BICD1Q96G01 975 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 ACO2Q99798 780 aaKnown RBP19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 TARS2Q9BW92 718 aaKnown RBP19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 PPP1R12CQ9BZL4 782 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 NAT10Q9H0A0 1025 aaKnown RBP19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 AGO3Q9H9G7 860 aaKnown RBP19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 ERVK-5Q9HDB9 667 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 AGPAT5Q9NUQ2 364 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 RWDD2AQ9UIY3 292 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 CTNND2Q9UQB3 1225 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 TRAF3IP3Q9Y228 551 aa19.6■□□□□ 0.73
SDCBP2-201ENST00000339987 BICDL2A1A5D9 508 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TRIM43BA6NCK2 446 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 HNRNPDLO14979 420 aaKnown RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 B4GALT5O43286 388 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TIMP1P01033 207 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 ARF4P18085 180 aaPredicted RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 CYP2C18P33260 490 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 LIG4P49917 911 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 LRRC63Q05C16 580 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 NCBP1Q09161 790 aaKnown RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 PAK2Q13177 524 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 C12orf56Q8IXR9 622 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TRIM43Q96BQ3 446 aaPredicted RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TSG101Q99816 390 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 BPIFA3Q9BQP9 254 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 OSBPL7Q9BZF2 842 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TSPY26PQ9H489 355 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 PRDM5Q9NQX1 630 aaPredicted RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 ST3GAL5Q9UNP4 418 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TNFSF13BQ9Y275 285 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 STYXL1Q9Y6J8 313 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TTLL13PA6NNM8 815 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 CALUO43852 315 aaPredicted RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 TOM1L1O75674 476 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 HOXA11P31270 313 aaPredicted RBP19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 RFC2P35250 354 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 GPNMBQ14956 572 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 NFIL3Q16649 462 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 EDRF1Q3B7T1 1238 aa19.59■□□□□ 0.73
SDCBP2-201ENST00000339987 ATF7IP2Q5U623 682 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms