RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ZDHHC18Q9NUE0 388 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 WRAP73Q9P2S5 460 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-202ENST00000339570 CEP83Q9Y592 693 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 DDX60LQ5H9U9 1706 aaKnown RBP17.37■□□□□ 0.37
SCARB1-202ENST00000339570 ZBTB48P10074 688 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-202ENST00000339570 SMARCA1P28370 1054 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.37■□□□□ 0.371e-7■■□□□ 13.5
SCARB1-202ENST00000339570 MYO3BQ8WXR4 1341 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 GSTTP1A0A1W2PQM5 241 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 PPFIA2O75334 1257 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 PIAS1O75925 651 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 ATP6V1G2O95670 118 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 KYNUQ16719 465 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 SLFN11Q7Z7L1 901 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 AGPAT1Q99943 283 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 TRIM7Q9C029 511 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 APEX2Q9UBZ4 518 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 GAS7O60861 476 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 TMEM253P0C7T8 217 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 MYBL1P10243 752 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 CYP4F22Q6NT55 531 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 UBL4BQ8N7F7 174 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 SLC17A8Q8NDX2 589 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 LENG9Q96B70 501 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 CBWD1Q9BRT8 395 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 AGPAT3Q9NRZ7 376 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCARB1-202ENST00000339570 PITPNM2Q9BZ72 1349 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 POU5F1Q01860 360 aaKnown RBP17.36■□□□□ 0.37
SCARB1-202ENST00000339570 CALCOCO2Q13137 446 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 PREPLQ4J6C6 727 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-202ENST00000339570 HYIQ5T013 277 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 TRPM8Q7Z2W7 1104 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 CCDC50Q8IVM0 306 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 DHX38Q92620 1227 aaKnown RBP17.36■□□□□ 0.37
SCARB1-202ENST00000339570 ARHGEF2Q92974 986 aaKnown RBP17.36■□□□□ 0.37
SCARB1-202ENST00000339570 ADAM7Q9H2U9 754 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 GH2P01242 217 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 PEX19P40855 299 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 DDR1Q08345 913 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 EPM2AIP1Q7L775 607 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-202ENST00000339570 SLC47A2Q86VL8 602 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 SPIRE2Q8WWL2 714 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 ZNF653Q96CK0 615 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 SAAL1Q96ER3 474 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 FAM167BQ9BTA0 163 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 MCM8Q9UJA3 840 aa17.36■□□□□ 0.37
SCARB1-202ENST00000339570 NAV1Q8NEY1 1877 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 XIRP1Q702N8 1843 aaKnown RBP17.35■□□□□ 0.37
SCARB1-202ENST00000339570 TMEM120BA0PK00 339 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 NDUFB10O96000 172 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 CHKAP35790 457 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 PPP1R18Q6NYC8 613 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 SRRM1Q8IYB3 904 aaKnown RBP17.35■□□□□ 0.37
SCARB1-202ENST00000339570 NSMCE1Q8WV22 266 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
SCARB1-202ENST00000339570 ECT2Q9H8V3 914 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 KLHL11Q9NVR0 708 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 GRHL1Q9NZI5 618 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 TRPC6Q9Y210 931 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 IGF2BP3O00425 579 aaKnown RBP eCLIP17.35■□□□□ 0.373e-8■■■□□ 18.8
SCARB1-202ENST00000339570 SLITRK3O94933 977 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 KRT5P13647 590 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 ECE1P42892 770 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 ATXN2LQ8WWM7 1075 aaKnown RBP17.35■□□□□ 0.37
SCARB1-202ENST00000339570 TLCD1Q96CP7 247 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 WDR18Q9BV38 432 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 KIFC3Q9BVG8 833 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 GPR88Q9GZN0 384 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
SCARB1-202ENST00000339570 ZMYM2Q9UBW7 1377 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 RARAP10276 462 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 IL1R1P14778 569 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 VCAM1P19320 739 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 PPP3CAQ08209 521 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 RBM26Q5T8P6 1007 aaKnown RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 C9orf72Q96LT7 481 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 ZNF317Q96PQ6 595 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 PCDHB18PQ96TA0 734 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 NUP85Q9BW27 656 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 CNOT10Q9H9A5 744 aaKnown RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 USTQ9Y2C2 406 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 ARHGEF35A5YM69 484 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 ANKRD62A6NC57 917 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 TOM1O60784 492 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 SPAG7O75391 227 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 EYA4O95677 639 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 JAG1P78504 1218 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 SP4Q02446 784 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 RNASELQ05823 741 aaKnown RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 PPATQ06203 517 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 KLHL29Q96CT2 875 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 NAP1L3Q99457 506 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 GPRC5CQ9NQ84 441 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms