RNA–Protein interactions for RNA: ENST00000338732.7

LFNG-202, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best) BASIC

Gene LFNG, Length 1,968 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-202ENST00000338732 SEPT9Q9UHD8 586 aaPredicted RBP17.1■□□□□ 0.33
LFNG-202ENST00000338732 DMGDHQ9UI17 866 aaKnown RBP17.1■□□□□ 0.33
LFNG-202ENST00000338732 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 EXOC3O60645 756 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 ATG7O95352 703 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 GJA5P36382 358 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 ZNF571Q7Z3V5 609 aaPredicted RBP17.09■□□□□ 0.33
LFNG-202ENST00000338732 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
LFNG-202ENST00000338732 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 SIX2Q9NPC8 291 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 NMRK2Q9NPI5 230 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 STIM2Q9P246 746 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 SYNGAP1Q96PV0 1343 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 TISP43B9A030 160 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 CES2O00748 559 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 JAM2P57087 298 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 Q3C1V9 767 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 TMEM174Q8WUU8 243 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 PSMB7Q99436 277 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 GCNT4Q9P109 453 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
LFNG-202ENST00000338732 LRRC37A2A6NM11 1700 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 DGAT1O75907 488 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 UBA1P22314 1058 aaKnown RBP17.08■□□□□ 0.33
LFNG-202ENST00000338732 NPTX2P47972 431 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 LMAN1P49257 510 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 SMTNP53814 917 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 DMP1Q13316 513 aaPredicted RBP17.08■□□□□ 0.33
LFNG-202ENST00000338732 XKR3Q5GH77 459 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.08■□□□□ 0.33
LFNG-202ENST00000338732 PACSIN1Q9BY11 444 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 PCIF1Q9H4Z3 704 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.33
LFNG-202ENST00000338732 RBM12Q9NTZ6 932 aaKnown RBP17.08■□□□□ 0.33
LFNG-202ENST00000338732 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.33
LFNG-202ENST00000338732 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
LFNG-202ENST00000338732 CCDC169A6NNP5 214 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 RNF40O75150 1001 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 COPB2P35606 906 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 FMO5P49326 533 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 HNRNPH2P55795 449 aaKnown RBP17.08■□□□□ 0.32
LFNG-202ENST00000338732 SOX10P56693 466 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 BFSP1Q12934 665 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 EMBQ6PCB8 327 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 RDH13Q8NBN7 331 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 BSNDQ8WZ55 320 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 NAGPAQ9UK23 515 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
LFNG-202ENST00000338732 ATP4AP20648 1035 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 EPHB4P54760 987 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
LFNG-202ENST00000338732 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 IFI16Q16666 785 aaKnown RBP17.07■□□□□ 0.32
LFNG-202ENST00000338732 C8orf74Q6P047 294 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 GSPT2Q8IYD1 628 aaKnown RBP17.07■□□□□ 0.32
LFNG-202ENST00000338732 MCPH1Q8NEM0 835 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 SPIRE2Q8WWL2 714 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 SLC10A4Q96EP9 437 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 NTPCRQ9BSD7 190 aaKnown RBP17.07■□□□□ 0.32
LFNG-202ENST00000338732 KIFC3Q9BVG8 833 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 KMT5AQ9NQR1 393 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 SMARCAL1Q9NZC9 954 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 EHD2Q9NZN4 543 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 TBX20Q9UMR3 447 aa17.07■□□□□ 0.32
LFNG-202ENST00000338732 AGPSO00116 658 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 GFPT2O94808 682 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
LFNG-202ENST00000338732 FTCDO95954 541 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 PGK2P07205 417 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
LFNG-202ENST00000338732 MTERF2Q49AM1 385 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 CBWD6Q4V339 395 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 CBWD3Q5JTY5 395 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 CBWD5Q5RIA9 395 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 HVCN1Q96D96 273 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 MS4A14Q96JA4 679 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 FGD4Q96M96 766 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 ATP6V0A4Q9HBG4 840 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 HSPBP1Q9NZL4 362 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 EXOC7Q9UPT5 735 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 IGKV6D-21A0A0A0MT36 114 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 PHACTR2O75167 634 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 RPS6KA5O75582 802 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 ACTN2P35609 894 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 GGCXP38435 758 aa17.06■□□□□ 0.32
LFNG-202ENST00000338732 ENOX2Q16206 610 aaKnown RBP17.06■□□□□ 0.32
LFNG-202ENST00000338732 ALKBH5Q6P6C2 394 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms