RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 HIP1RO75146 1068 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 PPP6R2O75170 966 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 PLCG1P19174 1290 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 SLC12A3P55017 1021 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 GRIN1Q05586 938 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 ADGRE1Q14246 886 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 FAM187BQ17R55 369 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 RRAGBQ5VZM2 374 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 CDCA2Q69YH5 1023 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 LINC00301Q8NCQ3 95 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 URGCPQ8TCY9 931 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 KCNG4Q8TDN1 519 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 GDPD5Q8WTR4 605 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 RUSC1Q9BVN2 902 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 STK17AQ9UEE5 414 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 MRPL42Q9Y6G3 142 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 CNTNAP2Q9UHC6 1331 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 EPOPA6NHQ4 379 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 C5orf67F2Z3F1 127 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 H0YCG3 227 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 ACKR2O00590 384 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 N4BP3O15049 544 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 PRKCBP05771 671 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 ITGA4P13612 1032 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 ARF4P18085 180 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 LAG3P18627 525 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 LIG1P18858 919 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 HOXA11P31270 313 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 DDIT3P35638 169 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 GATMP50440 423 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 PEX3P56589 373 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 PRPF4BQ13523 1007 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 SLC27A1Q6PCB7 646 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 BSNDQ8WZ55 320 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 RAD54LQ92698 747 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 P2RX5Q93086 422 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 EPSTI1Q96J88 318 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 CLIC6Q96NY7 704 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 CASD1Q96PB1 797 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 ADPGKQ9BRR6 497 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 LMAN2LQ9H0V9 348 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 FZD8Q9H461 694 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 KMT5AQ9NQR1 393 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 KANSL3Q9P2N6 904 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 ODF2LQ9ULJ1 636 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 MTCH2Q9Y6C9 303 aa12.49□□□□□ -0.41
SLC28A1-202ENST00000338602 A0A1B0GUA9 196 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 CUTAO60888 179 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 NCLP19338 710 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 SCP2P22307 547 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 NPTX2P47972 431 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 AMHR2Q16671 573 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 FOXD4L6Q3SYB3 417 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 FOXD4L3Q6VB84 417 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 SPRED2Q7Z698 418 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 GPBP1Q86WP2 473 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 HELQQ8TDG4 1101 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 CPB2Q96IY4 423 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 RSAD1Q9HA92 442 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 POLD4Q9HCU8 107 aa12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 TYW1Q9NV66 732 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-202ENST00000338602 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 FAM13AO94988 1023 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 BRD1O95696 1058 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 PLS3P13797 630 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 ATF7P17544 494 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 ABCD1P33897 745 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 PPM1AP35813 382 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 STAT6P42226 847 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 ALDH7A1P49419 539 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 RAD51AP2Q09MP3 1159 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 STRN3Q13033 797 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 MCM6Q14566 821 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 SKIV2LQ15477 1246 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 TIGD5Q53EQ6 642 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 THNSL1Q8IYQ7 743 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms