RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 AGPAT5Q9NUQ2 364 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
SEC13-201ENST00000337354 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 ENPP3O14638 875 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 TSPAN1O60635 241 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 MBD3O95983 291 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 RPN1P04843 607 aaKnown RBP16.91■□□□□ 0.3
SEC13-201ENST00000337354 PRKCBP05771 671 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 FGFR4P22455 802 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 CASP1P29466 404 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 HOXA11P31270 313 aaPredicted RBP16.91■□□□□ 0.3
SEC13-201ENST00000337354 EHHADHQ08426 723 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 COASYQ13057 564 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 PRPF4BQ13523 1007 aaKnown RBP16.91■□□□□ 0.3
SEC13-201ENST00000337354 KCNB1Q14721 858 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 AMHR2Q16671 573 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 HVCN1Q96D96 273 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 CCDC51Q96ER9 411 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
SEC13-201ENST00000337354 RGS18Q9NS28 235 aa16.91■□□□□ 0.3
SEC13-201ENST00000337354 A0A1B0GUA9 196 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 K7ENM7 598 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 KLRC4O43908 158 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 NMT1P30419 496 aaKnown RBP16.9■□□□□ 0.3
SEC13-201ENST00000337354 DSC3Q14574 896 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 C9orf50Q5SZB4 431 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 RASIP1Q5U651 963 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 SPATA20Q8TB22 786 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 PHOSPHO2Q8TCD6 241 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
SEC13-201ENST00000337354 ADAM2Q99965 735 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 STRA6Q9BX79 667 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 MRPL4Q9BYD3 311 aaKnown RBP16.9■□□□□ 0.3
SEC13-201ENST00000337354 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
SEC13-201ENST00000337354 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 TBX20Q9UMR3 447 aa16.9■□□□□ 0.3
SEC13-201ENST00000337354 PIN4Q9Y237 131 aaKnown RBP16.9■□□□□ 0.3
SEC13-201ENST00000337354 RHOBTB3O94955 611 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 PRR29P0C7W0 189 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 SKIP12755 728 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 ARF4P18085 180 aaPredicted RBP16.89■□□□□ 0.3
SEC13-201ENST00000337354 KCNJ6P48051 423 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.3
SEC13-201ENST00000337354 FAM189BP81408 668 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 SHHQ15465 462 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 TCTN1Q2MV58 587 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 KMT5BQ4FZB7 885 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 ZPBP2Q6X784 338 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 RTN4RL1Q86UN2 441 aaPredicted RBP16.89■□□□□ 0.3
SEC13-201ENST00000337354 EXOC7Q9UPT5 735 aa16.89■□□□□ 0.3
SEC13-201ENST00000337354 CNTNAP2Q9UHC6 1331 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 TCHHQ07283 1943 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 A0A0U1RQF3 1178 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 PPP1R37O75864 691 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 GCNT3O95395 438 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 AMHP03971 560 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 SARSP49591 514 aaKnown RBP16.89■□□□□ 0.29
SEC13-201ENST00000337354 RAB27AP51159 221 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 WDR5P61964 334 aaKnown RBP16.89■□□□□ 0.29
SEC13-201ENST00000337354 PNOCQ13519 176 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 TWF2Q6IBS0 349 aaKnown RBP16.89■□□□□ 0.29
SEC13-201ENST00000337354 TAS1R3Q7RTX0 852 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
SEC13-201ENST00000337354 MAP4K3Q8IVH8 894 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 SMARCE1Q969G3 411 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 ELAC1Q9H777 363 aaKnown RBP16.89■□□□□ 0.29
SEC13-201ENST00000337354 TMEM206Q9H813 350 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 TNFSF13BQ9Y275 285 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 PCDHA5Q9Y5H7 936 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 SLC4A7Q9Y6M7 1214 aa16.89■□□□□ 0.29
SEC13-201ENST00000337354 LOXHD1Q8IVV2 1947 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.88■□□□□ 0.29
SEC13-201ENST00000337354 ZBBXA8MT70 800 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 C9IYK1 514 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 N4BP3O15049 544 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEC13-201ENST00000337354 B4GALT5O43286 388 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 MGEA5O60502 916 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 ZNF623O75123 536 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 KIF20AO95235 890 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 PIGRP01833 764 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 TMEM132AQ24JP5 1023 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
SEC13-201ENST00000337354 NT5DC1Q5TFE4 455 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 ATF7IP2Q5U623 682 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 SLC27A1Q6PCB7 646 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 ZNF507Q8TCN5 953 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 GPT2Q8TD30 523 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 TOP1MTQ969P6 601 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 ACO2Q99798 780 aaKnown RBP16.88■□□□□ 0.29
SEC13-201ENST00000337354 ADPGKQ9BRR6 497 aa16.88■□□□□ 0.29
SEC13-201ENST00000337354 GBF1Q92538 1859 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms