RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GPR162Q16538 588 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 ZBTB33Q86T24 672 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 CREG2Q8IUH2 290 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 ASAP3Q8TDY4 903 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 PORCNQ9H237 461 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 AIPL1Q9NZN9 384 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 MYO1AQ9UBC5 1043 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 ADAMTS5Q9UNA0 930 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 GRID2IPA4D2P6 1211 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 COPB2P35606 906 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 STAT1P42224 750 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 OSTNP61366 133 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 TRADDQ15628 312 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 HSDL1Q3SXM5 330 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
LIMK1-201ENST00000336180 LBX2Q6XYB7 198 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 TATDN2Q93075 761 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 ARHGEF26Q96DR7 871 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 GPR88Q9GZN0 384 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 TMEM117Q9H0C3 514 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 OGFRQ9NZT2 677 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 DMGDHQ9UI17 866 aaKnown RBP13.66□□□□□ -0.22
LIMK1-201ENST00000336180 DBR1Q9UK59 544 aaKnown RBP13.66□□□□□ -0.22
LIMK1-201ENST00000336180 SSU72P8A0A1W2PR75 194 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 STBD1O95210 358 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 EPHX2P34913 555 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 GNPTABQ3T906 1256 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 TAS1R3Q7RTX0 852 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 NEK9Q8TD19 979 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 GLG1Q92896 1179 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 C12orf42Q96LP6 360 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 ZNF302Q9NR11 478 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 RBM12Q9NTZ6 932 aaKnown RBP13.66□□□□□ -0.22
LIMK1-201ENST00000336180 KCNK3O14649 394 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 CYP26A1O43174 497 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 SLC26A4O43511 780 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 SGPL1O95470 568 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 GJA5P36382 358 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 MXI1P50539 228 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 SMTNP53814 917 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 ATP6V0A1Q93050 837 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 BTBD6Q96KE9 485 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 TARS2Q9BW92 718 aaKnown RBP13.65□□□□□ -0.22
LIMK1-201ENST00000336180 AP1M1Q9BXS5 423 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 TSGA10Q9BZW7 698 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 KIAA1217Q5T5P2 1943 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 SOX5P35711 763 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 IREB2P48200 963 aaKnown RBP13.65□□□□□ -0.22
LIMK1-201ENST00000336180 GALCP54803 685 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 EMC2Q15006 297 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 APEX2Q9UBZ4 518 aa13.65□□□□□ -0.22
LIMK1-201ENST00000336180 PHIPQ8WWQ0 1821 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 SUPT20HL2P0C7V6 817 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 SFNP31947 248 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 NF2P35240 595 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 PRPF4BQ13523 1007 aaKnown RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 DOCK1Q14185 1865 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 KRT222Q8N1A0 295 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 EHBP1Q8NDI1 1231 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 PDE11AQ9HCR9 933 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 JAM2P57087 298 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 NLRP11P59045 1033 aaKnown RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 GTF2BQ00403 316 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 SLC47A2Q86VL8 602 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 SLC30A5Q8TAD4 765 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 PCYT2Q99447 389 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 THAP2Q9H0W7 228 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 RBPJLQ9UBG7 517 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 LCA5LO95447 670 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 CDR1P51861 262 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 SLC20A2Q08357 652 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 ZNF211Q13398 564 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 BMS1Q14692 1282 aaKnown RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 NAB2Q15742 525 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 ZNF771Q7L3S4 317 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-201ENST00000336180 TMEM206Q9H813 350 aa13.64□□□□□ -0.23
LIMK1-201ENST00000336180 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
LIMK1-201ENST00000336180 KRT5P13647 590 aa13.63□□□□□ -0.23
LIMK1-201ENST00000336180 TNFAIP3P21580 790 aa13.63□□□□□ -0.23
LIMK1-201ENST00000336180 DAAM2Q86T65 1068 aa13.63□□□□□ -0.23
LIMK1-201ENST00000336180 LMO3Q8TAP4 145 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms