RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
UBA1-201ENST00000335972 SEL1LQ9UBV2 794 aa16.06■□□□□ 0.16
UBA1-201ENST00000335972 ATP8A1Q9Y2Q0 1164 aa16.06■□□□□ 0.16
UBA1-201ENST00000335972 SNX24Q9Y343 169 aa16.06■□□□□ 0.16
UBA1-201ENST00000335972 EIF3HO15372 352 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■■□□ 15.9
UBA1-201ENST00000335972 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 PRPF38AQ8NAV1 312 aaKnown RBP16.05■□□□□ 0.16
UBA1-201ENST00000335972 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 TMEM117Q9H0C3 514 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 HSD17B4P51659 736 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 DHX9Q08211 1270 aaKnown RBP16.05■□□□□ 0.16
UBA1-201ENST00000335972 TNIP1Q15025 636 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 LLGL2Q6P1M3 1020 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 RIT2Q99578 217 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 MMEP08473 750 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 TMEM253P0C7T8 217 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 NR1D1P20393 614 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 TMOD1P28289 359 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 NOP9Q86U38 636 aaKnown RBP16.05■□□□□ 0.16
UBA1-201ENST00000335972 XXYLT1Q8NBI6 393 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 ACCSQ96QU6 501 aa16.05■□□□□ 0.16
UBA1-201ENST00000335972 SHOX2O60902 331 aaPredicted RBP16.04■□□□□ 0.16
UBA1-201ENST00000335972 RPS6KA5O75582 802 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 PLS3P13797 630 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 MXI1P50539 228 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 PRKG1Q13976 671 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 BSNDQ8WZ55 320 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 C18orf8Q96DM3 657 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 ATG4CQ96DT6 458 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 PPANQ9NQ55 473 aaKnown RBP16.04■□□□□ 0.16
UBA1-201ENST00000335972 VGLL3A8MV65 326 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 NDUFAB1O14561 156 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 DAB2IPQ5VWQ8 1189 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 KREMEN1Q96MU8 473 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 PTPN22Q9Y2R2 807 aa16.04■□□□□ 0.16
UBA1-201ENST00000335972 ADSSP30520 456 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 LIG3P49916 1009 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 PPATQ06203 517 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 TRAF1Q13077 416 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 BAATQ14032 418 aaPredicted RBP16.03■□□□□ 0.16
UBA1-201ENST00000335972 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
UBA1-201ENST00000335972 ZKSCAN4Q969J2 545 aaPredicted RBP16.03■□□□□ 0.16
UBA1-201ENST00000335972 STRA6Q9BX79 667 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 KCNJ1P48048 391 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 PLTPP55058 493 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 PGM5Q15124 567 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 RPAP3Q9H6T3 665 aaPredicted RBP16.03■□□□□ 0.16
UBA1-201ENST00000335972 ZNRF3Q9ULT6 936 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 ATAD5Q96QE3 1844 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 BCRP11274 1271 aa16.03■□□□□ 0.16
UBA1-201ENST00000335972 HSPA9P38646 679 aaKnown RBP16.03■□□□□ 0.16
UBA1-201ENST00000335972 DENND3A2RUS2 1198 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 COMTP21964 271 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 ZNF844Q08AG5 666 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 INTS8Q75QN2 995 aaKnown RBP16.02■□□□□ 0.16
UBA1-201ENST00000335972 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 TAS1R2Q8TE23 839 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 RUBCNQ92622 972 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 TATDN2Q93075 761 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 ATP6V1G3Q96LB4 118 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 GJA3Q9Y6H8 435 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 TLDC2A0PJX2 215 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 VCAM1P19320 739 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 CYFIP1Q7L576 1253 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 UBIAD1Q9Y5Z9 338 aa16.02■□□□□ 0.16
UBA1-201ENST00000335972 ZNF646O15015 1829 aaPredicted RBP16.02■□□□□ 0.15
UBA1-201ENST00000335972 ANKRD62A6NC57 917 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 MYO1FO00160 1098 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 KRT5P13647 590 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 CHRNB2P17787 502 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 KCNA3P22001 575 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 SNRNP35Q16560 246 aaKnown RBP16.02■□□□□ 0.15
UBA1-201ENST00000335972 ANO5Q75V66 913 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 TRIM7Q9C029 511 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 GABBR1Q9UBS5 961 aa16.02■□□□□ 0.15
UBA1-201ENST00000335972 NOVA2Q9UNW9 492 aaKnown RBP16.02■□□□□ 0.15
UBA1-201ENST00000335972 UTP11Q9Y3A2 253 aaKnown RBP16.02■□□□□ 0.15
UBA1-201ENST00000335972 A0A0A6YYK5 440 aaPredicted RBP16.01■□□□□ 0.15
UBA1-201ENST00000335972 GOLGA6L10A6NI86 522 aa16.01■□□□□ 0.15
UBA1-201ENST00000335972 DR1Q01658 176 aa16.01■□□□□ 0.15
UBA1-201ENST00000335972 NBPF12Q5TAG4 269 aaPredicted RBP16.01■□□□□ 0.15
UBA1-201ENST00000335972 RASGEF1CQ8N431 466 aa16.01■□□□□ 0.15
UBA1-201ENST00000335972 CCDC26Q8TAB7 109 aa16.01■□□□□ 0.15
UBA1-201ENST00000335972 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
UBA1-201ENST00000335972 EBAG9O00559 213 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms