RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CCDC169A6NNP5 214 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 EIF3HO15372 352 aaKnown RBP eCLIP19.14■□□□□ 0.668e-6■□□□□ 10.6
LRCH3-201ENST00000334859 P4HA2O15460 535 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 DDX3YO15523 660 aaKnown RBP19.14■□□□□ 0.66
LRCH3-201ENST00000334859 DAPK3O43293 454 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 VCAM1P19320 739 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 KCNA3P22001 575 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 IRX5P78411 483 aaPredicted RBP19.14■□□□□ 0.66
LRCH3-201ENST00000334859 GTF2BQ00403 316 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 PDCLQ13371 301 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 CEP85LQ5SZL2 805 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 C1orf220Q5T0J3 134 aa19.14■□□□□ 0.66
LRCH3-201ENST00000334859 ADAT2Q7Z6V5 191 aaKnown RBP19.14■□□□□ 0.66
LRCH3-201ENST00000334859 GOLGA6L10A6NI86 522 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 WDR64B1ANS9 1081 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 ATP9AO75110 1047 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 PSMC5P62195 406 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 GHRHRQ02643 423 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 ZNF211Q13398 564 aaPredicted RBP19.14■□□□□ 0.65
LRCH3-201ENST00000334859 RHOT2Q8IXI1 618 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 RPUSD2Q8IZ73 545 aaKnown RBP19.14■□□□□ 0.65
LRCH3-201ENST00000334859 PLEKHO2Q8TD55 490 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 KAT5Q92993 513 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 LRRC45Q96CN5 670 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 CAMKK2Q96RR4 588 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 KIFC3Q9BVG8 833 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 NEUROG2Q9H2A3 272 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 CENPHQ9H3R5 247 aa19.14■□□□□ 0.65
LRCH3-201ENST00000334859 CCNE2O96020 404 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 FTLP02792 175 aaPredicted RBP19.13■□□□□ 0.65
LRCH3-201ENST00000334859 ADRB2P07550 413 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 HSD17B3P37058 310 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 JAK3P52333 1124 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 ARHGEF16Q5VV41 709 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 CIAPIN1Q6FI81 312 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 RNF207Q6ZRF8 634 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 CD302Q8IX05 232 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 C4orf19Q8IY42 314 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 PPM1KQ8N3J5 372 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 IWS1Q96ST2 819 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 PDCD2LQ9BRP1 358 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 CARD9Q9H257 536 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 DPH5Q9H2P9 285 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 UTP11Q9Y3A2 253 aaKnown RBP19.13■□□□□ 0.65
LRCH3-201ENST00000334859 GOLGA6L10A0A0M3HER8 536 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 TMEM110-MUSTN1A8MSY1 372 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 SKOR1P84550 965 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 MAP2K1Q02750 393 aaPredicted RBP19.13■□□□□ 0.65
LRCH3-201ENST00000334859 CBWD2Q8IUF1 395 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 C10orf67Q8IYJ2 551 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 BCAS4Q8TDM0 211 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 CCDC127Q96BQ5 260 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 SAAL1Q96ER3 474 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 TIPINQ9BVW5 301 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 TRIM31Q9BZY9 425 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 TMEM117Q9H0C3 514 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 RPAP3Q9H6T3 665 aaPredicted RBP19.13■□□□□ 0.65
LRCH3-201ENST00000334859 PXMP2Q9NR77 195 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 TTC7AQ9ULT0 858 aaPredicted RBP19.13■□□□□ 0.65
LRCH3-201ENST00000334859 NR2E1Q9Y466 385 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 FER1L6Q2WGJ9 1857 aa19.13■□□□□ 0.65
LRCH3-201ENST00000334859 TRIM66O15016 1216 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 EGFRP00533 1210 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 NCKAP1LP55160 1127 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 KRT76Q01546 638 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 TNFAIP1Q13829 316 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 SNRNP35Q16560 246 aaKnown RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 VTI1AQ96AJ9 217 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 ATP6V1G3Q96LB4 118 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 NAP1L3Q99457 506 aaPredicted RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 TRIM51Q9BSJ1 452 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 ST6GALNAC4Q9H4F1 302 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 TMOD4Q9NZQ9 345 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 DIS3Q9Y2L1 958 aaKnown RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 ZBED4O75132 1171 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 NR1D1P20393 614 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 SFNP31947 248 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 CTNNA1P35221 906 aaKnown RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 COPB2P35606 906 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 CCT5P48643 541 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 DMP1Q13316 513 aaPredicted RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 SF3B2Q13435 895 aaKnown RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 TMEM174Q8WUU8 243 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 UBLCP1Q8WVY7 318 aaPredicted RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 ALG3Q92685 438 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 TEPSINQ96N21 525 aa19.12■□□□□ 0.65
LRCH3-201ENST00000334859 MAP3K20Q9NYL2 800 aaKnown RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 CHORDC1Q9UHD1 332 aaPredicted RBP19.12■□□□□ 0.65
LRCH3-201ENST00000334859 SGPL1O95470 568 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 SMTNP53814 917 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 OR2W6PQ8NHA6 318 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 TBX20Q9UMR3 447 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 EXOC7Q9UPT5 735 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 ALG6Q9Y672 507 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 MAPK13O15264 365 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 PTENP60484 403 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 UAP1Q16222 522 aaPredicted RBP19.11■□□□□ 0.65
LRCH3-201ENST00000334859 KDM7AQ6ZMT4 941 aa19.11■□□□□ 0.65
LRCH3-201ENST00000334859 SLC17A8Q8NDX2 589 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms