RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 PER2O15055 1255 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 MED24O75448 989 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.411e-7■■■■■ 32.1
C9orf85-201ENST00000334731 PPM1AP35813 382 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 PTENP60484 403 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 KRT17Q04695 432 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 POU5F1BQ06416 359 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 GNL2Q13823 731 aaKnown RBP12.48□□□□□ -0.41
C9orf85-201ENST00000334731 SMAD2Q15796 467 aaKnown RBP12.48□□□□□ -0.41
C9orf85-201ENST00000334731 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 UBXN11Q5T124 520 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 GLB1LQ6UWU2 654 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
C9orf85-201ENST00000334731 SLC39A11Q8N1S5 342 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 C4orf32Q8N8J7 132 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 MSLNLQ96KJ4 702 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
C9orf85-201ENST00000334731 MRPL9Q9BYD2 267 aaKnown RBP12.48□□□□□ -0.41
C9orf85-201ENST00000334731 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 CD207Q9UJ71 328 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 WDR81Q562E7 1941 aa12.48□□□□□ -0.41
C9orf85-201ENST00000334731 MBTPS2O43462 519 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 EYA4O95677 639 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 GLP2RO95838 553 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 GLRA2P23416 452 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 ALDH7A1P49419 539 aaKnown RBP12.47□□□□□ -0.41
C9orf85-201ENST00000334731 NDUFV1P49821 464 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 TOB1P50616 345 aaPredicted RBP12.47□□□□□ -0.41
C9orf85-201ENST00000334731 BCAR1P56945 870 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
C9orf85-201ENST00000334731 TFDP1Q14186 410 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 NBR1Q14596 966 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.41
C9orf85-201ENST00000334731 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 PGBD4Q96DM1 585 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 NACC1Q96RE7 527 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 TCF25Q9BQ70 676 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 NGRNQ9NPE2 291 aaKnown RBP12.47□□□□□ -0.41
C9orf85-201ENST00000334731 TBC1D13Q9NVG8 400 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 PRKAG3Q9UGI9 489 aa12.47□□□□□ -0.41
C9orf85-201ENST00000334731 DBR1Q9UK59 544 aaKnown RBP12.47□□□□□ -0.41
C9orf85-201ENST00000334731 HIDE1A8MVS5 230 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 NT5C1B-RDH14C9J2C7 533 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 PI4K2BG5E9Z4 385 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 SNPHO15079 494 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 TSPAN1O60635 241 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 RPA1P27694 616 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 SSTR3P32745 418 aaPredicted RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 ZP2Q05996 745 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 MBTD1Q05BQ5 628 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 COASYQ13057 564 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 SMAD4Q13485 552 aaKnown RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 CAPSQ13938 189 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 KCNC3Q14003 757 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 DUSP6Q16828 381 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 PLPP4Q5VZY2 271 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 ADHFE1Q8IWW8 467 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 VN1R2Q8NFZ6 395 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 ERMNQ8TAM6 284 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 TMX3Q96JJ7 454 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 CCDC43Q96MW1 224 aaKnown RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 CDCA3Q99618 268 aaPredicted RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 NRDE2Q9H7Z3 1164 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 BARX2Q9UMQ3 279 aaPredicted RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
C9orf85-201ENST00000334731 INPP5FQ9Y2H2 1132 aa12.46□□□□□ -0.41
C9orf85-201ENST00000334731 FNDC1Q4ZHG4 1894 aaPredicted RBP12.46□□□□□ -0.42
C9orf85-201ENST00000334731 INO80B-WBP1J3KQ70 363 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 USO1O60763 962 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 ZC3H11AO75152 810 aaKnown RBP eCLIP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 ERLIN2O94905 339 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 GALTP07902 379 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 AXLP30530 894 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 AMHR2Q16671 573 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 TMEM184AQ6ZMB5 413 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 TMC7Q7Z402 723 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 TMEM173Q86WV6 379 aaPredicted RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 ZNF280BQ86YH2 543 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 MRPL43Q8N983 215 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 SMRP1Q8NCR6 262 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 SMG8Q8ND04 991 aaKnown RBP12.45□□□□□ -0.42
C9orf85-201ENST00000334731 CNNM3Q8NE01 707 aa12.45□□□□□ -0.42
C9orf85-201ENST00000334731 CPB2Q96IY4 423 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms