RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FSD1LQ9BXM9 530 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 GPTP24298 496 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 PTGDRQ13258 359 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 UNC13DQ70J99 1090 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 LONP2Q86WA8 852 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 TSPYL6Q8N831 410 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 FAF2Q96CS3 445 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 MAGEB18Q96M61 343 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 DISC1Q9NRI5 854 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 HPS5Q9UPZ3 1129 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 CLIC4Q9Y696 253 aa5.85□□□□□ -1.47
PTPRB-202ENST00000334414 NBNO60934 754 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 BRAFP15056 766 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TRMT5Q32P41 509 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CYFIP1Q7L576 1253 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SNX19Q92543 992 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 RBBP8Q99708 897 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CDYLQ9Y232 598 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 HSPD1P10809 573 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 LSP1P33241 339 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TTC39BQ5VTQ0 682 aaPredicted RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SCYL2Q6P3W7 929 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 FAM47EQ6ZV65 393 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SMYD3Q9H7B4 428 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 NRBP2Q9NSY0 501 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 MAP3K15Q6ZN16 1313 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SNAPC5O75971 98 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 S100A9P06702 114 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 GSPT1P15170 499 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 RGS2P41220 211 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 KYNUQ16719 465 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 PCDHA5Q9Y5H7 936 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 PDZK1P1A8MUH7 402 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 VWA5AO00534 786 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 RECQLP46063 649 aaPredicted RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 GPC5P78333 572 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 PDAP1Q13442 181 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 HIF1AQ16665 826 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 ZFP1Q6P2D0 407 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TMC4Q7Z404 712 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SERPINB12Q96P63 405 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 KCNJ14Q9UNX9 436 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 COMMD3-BMI1R4GMX3 469 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 OSBPP22059 807 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 ITGA1P56199 1179 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 PTGISQ16647 500 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TMC5Q6UXY8 1006 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 NLRP4Q96MN2 994 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CIDEBQ9UHD4 219 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 RPL26L1Q9UNX3 145 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 VCPP55072 806 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 DMC1Q14565 340 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 MTHFSDQ2M296 383 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 GAS2L3Q86XJ1 694 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TBC1D19Q8N5T2 526 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 MCUQ8NE86 351 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TEKT4Q8WW24 435 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CCDC126Q96EE4 140 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 HMG20AQ9NP66 347 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CTNNAL1Q9UBT7 734 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 AKAP10O43572 662 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CAPN12Q6ZSI9 719 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SKA2Q8WVK7 121 aaPredicted RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 TIPINQ9BVW5 301 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 SLC39A2Q9NP94 309 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 GPCPD1Q9NPB8 672 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 COPG2Q9UBF2 871 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 IQGAP3Q86VI3 1631 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 ANP32DO95626 131 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 PSMC3P17980 439 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 COPAP53621 1224 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 PTPN12Q05209 780 aaKnown RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 FLCNQ8NFG4 579 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CAAP1Q9H8G2 361 aa5.84□□□□□ -1.47
PTPRB-202ENST00000334414 GPHNQ9NQX3 736 aaPredicted RBP5.84□□□□□ -1.47
PTPRB-202ENST00000334414 CFAP69A5D8W1 941 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 JAK2O60674 1132 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 TRIM13O60858 407 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 ALOX5P09917 674 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 CLK1P49759 484 aaKnown RBP5.84□□□□□ -1.48
PTPRB-202ENST00000334414 LRRC49Q8IUZ0 686 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 RHOT1Q8IXI2 618 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 SVOPQ8N4V2 548 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 LZTS1Q9Y250 596 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 LIFRP42702 1097 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 R3HDM1Q15032 1099 aaKnown RBP5.84□□□□□ -1.48
PTPRB-202ENST00000334414 TJAP1Q5JTD0 557 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 ARHGEF16Q5VV41 709 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 RASGRP2Q7LDG7 609 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 RBBP8NLQ8NC74 664 aaPredicted RBP5.84□□□□□ -1.48
PTPRB-202ENST00000334414 PAGE5Q96GU1 130 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 CHAMP1Q96JM3 812 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 FBXO28Q9NVF7 368 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 GGA1Q9UJY5 639 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.84□□□□□ -1.48
PTPRB-202ENST00000334414 VPS9D1Q9Y2B5 631 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 UGGT1Q9NYU2 1555 aa5.84□□□□□ -1.48
PTPRB-202ENST00000334414 CNTFP26441 200 aa5.83□□□□□ -1.48
PTPRB-202ENST00000334414 TECP42680 631 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms