RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 UBASH3AP57075 661 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 MBTD1Q05BQ5 628 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 FAM47CQ5HY64 1035 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 GDF6Q6KF10 455 aaPredicted RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ANKRD20A12PQ8NF67 263 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 DEFB118Q96PH6 123 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 MINDY3Q9H8M7 445 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 TAB2Q9NYJ8 693 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 A0A1W2PQ45 241 aaPredicted RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 A0A1W2PQY0 241 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 GNA14O95837 355 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 PRKCBP05771 671 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 CASP4P49662 377 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 LIG4P49917 911 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 CYP2J2P51589 502 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 COPB1P53618 953 aaKnown RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ITGA7Q13683 1181 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 MAPK6Q16659 721 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ARMCX5Q6P1M9 558 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ZNF410Q86VK4 478 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 CREBRFQ8IUR6 639 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 DNAJB3Q8WWF6 145 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 BICD1Q96G01 975 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 GLT1D1Q96MS3 346 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 TUBGCP2Q9BSJ2 902 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ADAMTS10Q9H324 1103 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 FZD8Q9H461 694 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 PHF24Q9UPV7 400 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 KBTBD13C9JR72 458 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 INO80B-WBP1J3KQ70 363 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 DNM1LO00429 736 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 GPR32O75388 356 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 MTIF2P46199 727 aaKnown RBP13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 CCDC173Q0VFZ6 552 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 KIZQ2M2Z5 673 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 MIIPQ5JXC2 388 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 ZPBP2Q6X784 338 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 SERINC5Q86VE9 423 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 ZNF333Q96JL9 665 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 PPP1R9BQ96SB3 815 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 MKNK1Q9BUB5 465 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 MRPL4Q9BYD3 311 aaKnown RBP13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 INO80BQ9C086 356 aaPredicted RBP13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 HSPBP1Q9NZL4 362 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 OGDHLQ9ULD0 1010 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 STYXL1Q9Y6J8 313 aa13.22□□□□□ -0.29
TRIM49B-201ENST00000332682 LGALS16A8MUM7 142 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 ACKR2O00590 384 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 EXOC3O60645 756 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 GARTP22102 1010 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 CDC25BP30305 580 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 PTPN11Q06124 597 aaPredicted RBP13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 NR1I3Q14994 352 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 AMHR2Q16671 573 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 MAN2A1Q16706 1144 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 FAM187BQ17R55 369 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 TRIM59Q8IWR1 403 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 XXYLT1Q8NBI6 393 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 WNT8BQ93098 351 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 VPS16Q9H269 839 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 PRMT7Q9NVM4 692 aaPredicted RBP13.21□□□□□ -0.29
TRIM49B-201ENST00000332682 CNTNAP2Q9UHC6 1331 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 N4BP3O15049 544 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 TEX33O43247 280 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 B4GALT5O43286 388 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 CSDE1O75534 798 aaKnown RBP13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 TPM3P06753 285 aa13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
TRIM49B-201ENST00000332682 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms