RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 FAM187BQ17R55 369 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 KANK3Q6NY19 840 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 PPP4R3CPQ6ZMV5 832 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 CPB2Q96IY4 423 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 RNPC3Q96LT9 517 aaKnown RBP28.58■■■□□ 2.17
SMDT1-201ENST00000331479 FGFBP2Q9BYJ0 223 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 TSPYL2Q9H2G4 693 aaPredicted RBP28.58■■■□□ 2.17
SMDT1-201ENST00000331479 SEL1LQ9UBV2 794 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 PHLPP2Q6ZVD8 1323 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 GOLGA6L22H0YM25 854 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 KINO60870 393 aaKnown RBP28.58■■■□□ 2.17
SMDT1-201ENST00000331479 ARF4P18085 180 aaPredicted RBP28.58■■■□□ 2.17
SMDT1-201ENST00000331479 DEFB103AP81534 67 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 DPYDQ12882 1025 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 TDHQ8IZJ6 230 aa28.58■■■□□ 2.17
SMDT1-201ENST00000331479 MRPL44Q9H9J2 332 aaKnown RBP28.58■■■□□ 2.17
SMDT1-201ENST00000331479 ACKR2O00590 384 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 MYL1P05976 194 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 PNOCQ13519 176 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 POSTNQ15063 836 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 ZC2HC1CQ53FD0 456 aaPredicted RBP28.57■■■□□ 2.16
SMDT1-201ENST00000331479 ZNF720Q7Z2F6 126 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 PRIMPOLQ96LW4 560 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 OLFML3Q9NRN5 406 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 RGS18Q9NS28 235 aa28.57■■■□□ 2.16
SMDT1-201ENST00000331479 PVALEFA0A1B0GWK0 134 aa28.56■■■□□ 2.16
SMDT1-201ENST00000331479 EFCAB14O75071 495 aa28.56■■■□□ 2.16
SMDT1-201ENST00000331479 ZSCAN20P17040 1043 aaPredicted RBP28.56■■■□□ 2.16
SMDT1-201ENST00000331479 CASP5P51878 434 aa28.56■■■□□ 2.16
SMDT1-201ENST00000331479 EHHADHQ08426 723 aa28.56■■■□□ 2.16
SMDT1-201ENST00000331479 CHST12Q9NRB3 414 aa28.56■■■□□ 2.16
SMDT1-201ENST00000331479 PRPF4BQ13523 1007 aaKnown RBP28.55■■■□□ 2.16
SMDT1-201ENST00000331479 NT5DC1Q5TFE4 455 aa28.55■■■□□ 2.16
SMDT1-201ENST00000331479 TMCO2Q7Z6W1 182 aaPredicted RBP28.55■■■□□ 2.16
SMDT1-201ENST00000331479 CDR2LQ86X02 465 aaPredicted RBP28.55■■■□□ 2.16
SMDT1-201ENST00000331479 GLIS3Q8NEA6 775 aa28.55■■■□□ 2.16
SMDT1-201ENST00000331479 ERCC4Q92889 916 aaPredicted RBP28.55■■■□□ 2.16
SMDT1-201ENST00000331479 KCNN1Q92952 543 aa28.55■■■□□ 2.16
SMDT1-201ENST00000331479 SLC4A7Q9Y6M7 1214 aa28.55■■■□□ 2.16
SMDT1-201ENST00000331479 PTPRSQ13332 1948 aa28.55■■■□□ 2.16
SMDT1-201ENST00000331479 CNTNAP2Q9UHC6 1331 aa28.55■■■□□ 2.16
SMDT1-201ENST00000331479 KCNJ6P48051 423 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 GTF2BQ00403 316 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 KMT5BQ4FZB7 885 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 CCDC34Q96HJ3 373 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 STRA6Q9BX79 667 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 MTIF3Q9H2K0 278 aaKnown RBP28.54■■■□□ 2.16
SMDT1-201ENST00000331479 ST6GALNAC4Q9H4F1 302 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 TBX20Q9UMR3 447 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 H0YCG3 227 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 PPP1R37O75864 691 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 RPN1P04843 607 aaKnown RBP28.54■■■□□ 2.16
SMDT1-201ENST00000331479 MYBP10242 640 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 AXLP30530 894 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 NCBP1Q09161 790 aaKnown RBP28.54■■■□□ 2.16
SMDT1-201ENST00000331479 TWF2Q6IBS0 349 aaKnown RBP28.54■■■□□ 2.16
SMDT1-201ENST00000331479 MYOCDQ8IZQ8 938 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 GPT2Q8TD30 523 aa28.54■■■□□ 2.16
SMDT1-201ENST00000331479 A0A1B0GUA9 196 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 C9IYK1 514 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 GCNT3O95395 438 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 IBSPP21815 317 aaPredicted RBP28.53■■■□□ 2.16
SMDT1-201ENST00000331479 MCM4P33991 863 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 UBXN11Q5T124 520 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 NOTUMQ6P988 496 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 SLC24A5Q71RS6 500 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 ELOA2Q8IYF1 753 aaPredicted RBP28.53■■■□□ 2.16
SMDT1-201ENST00000331479 SLC17A8Q8NDX2 589 aa28.53■■■□□ 2.16
SMDT1-201ENST00000331479 TARS2Q9BW92 718 aaKnown RBP28.53■■■□□ 2.16
SMDT1-201ENST00000331479 AMHP03971 560 aa28.52■■■□□ 2.16
SMDT1-201ENST00000331479 STRN3Q13033 797 aa28.52■■■□□ 2.16
SMDT1-201ENST00000331479 FAM26FQ5R3K3 315 aa28.52■■■□□ 2.16
SMDT1-201ENST00000331479 FAM109BQ6ICB4 259 aaPredicted RBP28.52■■■□□ 2.16
SMDT1-201ENST00000331479 FAM43BQ6ZT52 329 aaPredicted RBP28.52■■■□□ 2.16
SMDT1-201ENST00000331479 MRPL4Q9BYD3 311 aaKnown RBP28.52■■■□□ 2.16
SMDT1-201ENST00000331479 PDZD7Q9H5P4 517 aa28.52■■■□□ 2.16
SMDT1-201ENST00000331479 C1orf112Q9NSG2 853 aa28.52■■■□□ 2.16
SMDT1-201ENST00000331479 KCNA1Q09470 495 aa28.51■■■□□ 2.15
SMDT1-201ENST00000331479 ACO2Q99798 780 aaKnown RBP28.51■■■□□ 2.15
SMDT1-201ENST00000331479 TRAIPQ9BWF2 469 aa28.51■■■□□ 2.15
SMDT1-201ENST00000331479 EIF2AQ9BY44 585 aaKnown RBP28.51■■■□□ 2.15
SMDT1-201ENST00000331479 SLC39A2Q9NP94 309 aa28.51■■■□□ 2.15
SMDT1-201ENST00000331479 EXOC1Q9NV70 894 aa28.51■■■□□ 2.15
SMDT1-201ENST00000331479 TTC3P53804 2025 aa28.51■■■□□ 2.15
SMDT1-201ENST00000331479 ATP2A2P16615 1042 aaKnown RBP28.5■■■□□ 2.15
SMDT1-201ENST00000331479 SARSP49591 514 aaKnown RBP28.5■■■□□ 2.15
SMDT1-201ENST00000331479 FAM189BP81408 668 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 TMEM132AQ24JP5 1023 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 ATF7IP2Q5U623 682 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 EEF1DP3Q658K8 133 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 CRIPAKQ8N1N5 446 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 TOP1MTQ969P6 601 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 IKZF4Q9H2S9 585 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 A0A0U1RQF3 1178 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 GRXCR1A8MXD5 290 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 UPP2O95045 317 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 SCP2P22307 547 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 MAP4K3Q8IVH8 894 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 SLC9A7Q96T83 725 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 FAM105AQ9NUU6 356 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms