RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 HIP1RO75146 1068 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 PYGMP11217 842 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 CREB1P16220 341 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 TRIP13Q15645 432 aaPredicted RBP21.43■■□□□ 1.02
CRLF3-201ENST00000324238 EPC2Q52LR7 807 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 ANKRD20A8PQ5CZ79 823 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 MKL1Q969V6 931 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 PRMT1Q99873 361 aaKnown RBP21.43■■□□□ 1.02
CRLF3-201ENST00000324238 UNC45AQ9H3U1 944 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 SUGT1Q9Y2Z0 365 aa21.43■■□□□ 1.02
CRLF3-201ENST00000324238 PPFIA2O75334 1257 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 AGBL2Q5U5Z8 902 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 GKAP1Q5VSY0 366 aaPredicted RBP21.42■■□□□ 1.02
CRLF3-201ENST00000324238 DAB2IPQ5VWQ8 1189 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 DENND2CQ68D51 928 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 TATDN2Q93075 761 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 SYT11Q9BT88 431 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 POLR3CQ9BUI4 534 aaPredicted RBP21.42■■□□□ 1.02
CRLF3-201ENST00000324238 GOLGA6L10A0A0M3HER8 536 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 K7ENM7 598 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 TBX3O15119 743 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 VCAM1P19320 739 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 HOXA7P31268 230 aaPredicted RBP21.42■■□□□ 1.02
CRLF3-201ENST00000324238 SCTRP47872 440 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 TAX1BP1Q86VP1 789 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 CEP89Q96ST8 783 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 FAM118BQ9BPY3 351 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 ELAC2Q9BQ52 826 aaKnown RBP21.42■■□□□ 1.02
CRLF3-201ENST00000324238 RAB17Q9H0T7 212 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 PDE6BP35913 854 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 SLC27A3Q5K4L6 730 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 SPATS2Q86XZ4 545 aaKnown RBP21.42■■□□□ 1.02
CRLF3-201ENST00000324238 LRRC34Q8IZ02 419 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 CPXCR1Q8N123 301 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 ZKSCAN4Q969J2 545 aaPredicted RBP21.42■■□□□ 1.02
CRLF3-201ENST00000324238 CCDC127Q96BQ5 260 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 PWWP2AQ96N64 755 aa21.42■■□□□ 1.02
CRLF3-201ENST00000324238 RPTORQ8N122 1335 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 C21orf2O43822 256 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 VIMP08670 466 aaKnown RBP21.41■■□□□ 1.02
CRLF3-201ENST00000324238 VPS41P49754 854 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 BFSP1Q12934 665 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 MAPK7Q13164 816 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 FAM133BQ5BKY9 247 aaKnown RBP21.41■■□□□ 1.02
CRLF3-201ENST00000324238 CCDC105Q8IYK2 499 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 DAW1Q8N136 415 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 C1orf131Q8NDD1 294 aaKnown RBP21.41■■□□□ 1.02
CRLF3-201ENST00000324238 NEK9Q8TD19 979 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 SEC14L1Q92503 715 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 HVCN1Q96D96 273 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 LXNQ9BS40 222 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 RGS16O15492 202 aaPredicted RBP21.41■■□□□ 1.02
CRLF3-201ENST00000324238 CYP26A1O43174 497 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
CRLF3-201ENST00000324238 MOXD1Q6UVY6 613 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 ZNF577Q9BSK1 485 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 DDX23Q9BUQ8 820 aaKnown RBP21.41■■□□□ 1.02
CRLF3-201ENST00000324238 ADAM7Q9H2U9 754 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 GPRC5CQ9NQ84 441 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 GRHL1Q9NZI5 618 aa21.41■■□□□ 1.02
CRLF3-201ENST00000324238 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 PSMD10O75832 226 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 FOSP01100 380 aaPredicted RBP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 CDR1P51861 262 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 STAT2P52630 851 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 CCDC137Q6PK04 289 aaKnown RBP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 YTHDF3Q7Z739 585 aaKnown RBP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 SLC47A2Q86VL8 602 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 PLEKHO2Q8TD55 490 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 C1orf54Q8WWF1 131 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 CHMP6Q96FZ7 201 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 TXLNGYQ9BZA5 131 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 PABPC3Q9H361 631 aaKnown RBP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 NCANO14594 1321 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 GTPBP10A4D1E9 387 aaKnown RBP21.4■■□□□ 1.02
CRLF3-201ENST00000324238 RASSF9O75901 435 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 ACSL3O95573 720 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 GAP43P17677 238 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 NPEPPSP55786 919 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 LLGL2Q6P1M3 1020 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 TATDN1Q6P1N9 297 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 PPM1KQ8N3J5 372 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 TLCD1Q96CP7 247 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 CARD9Q9H257 536 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 INTUQ9ULD6 942 aa21.4■■□□□ 1.02
CRLF3-201ENST00000324238 ARHGEF35A5YM69 484 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 CYP3A4P08684 503 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 CIITAP33076 1130 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 SMTNP53814 917 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 MAP2K1Q02750 393 aaPredicted RBP21.39■■□□□ 1.02
CRLF3-201ENST00000324238 LONRF1Q17RB8 773 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 CYB5D1Q6P9G0 228 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 FUKQ8N0W3 1084 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 LMO3Q8TAP4 145 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 PAGR1Q9BTK6 254 aa21.39■■□□□ 1.02
CRLF3-201ENST00000324238 PPIP5K2O43314 1243 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 PTGIRP43119 386 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms