RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 FGD4Q96M96 766 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 HAPLN3Q96S86 360 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 LRRC27Q9C0I9 530 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 ACTL7BQ9Y614 415 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 ROBO3Q96MS0 1386 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 PCDH11YQ9BZA8 1340 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 ENTPD5O75356 428 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 TJP3O95049 919 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 HSPA6P17066 643 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 VHLP40337 213 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 SIX1Q15475 284 aaPredicted RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 ENOX2Q16206 610 aaKnown RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 LETM2Q2VYF4 491 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 HYIQ5T013 277 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 FRMD5Q7Z6J6 570 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 LONP2Q86WA8 852 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 HAO1Q9UJM8 370 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 SPATA31A1Q5TZJ5 1347 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 TTLL1O95922 423 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 CYP1A1P04798 512 aaPredicted RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 EPHB2P29323 1055 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 NT5C2P49902 561 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 PPP4R3CPQ6ZMV5 832 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 C4orf50Q6ZRC1 276 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 MGARPQ8TDB4 240 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 DYDC1Q8WWB3 177 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 SLCO2A1Q92959 643 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 PLEKHG4BQ96PX9 1271 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 CCDC28BQ9BUN5 200 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 DDX23Q9BUQ8 820 aaKnown RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 CDC42EP4Q9H3Q1 356 aaKnown RBP8.39□□□□□ -1.07
CD46-201ENST00000322875 SCOCQ9UIL1 159 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 COG5Q9UP83 839 aa8.39□□□□□ -1.07
CD46-201ENST00000322875 GGPS1O95749 300 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 MUTP22033 750 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 ATP5DP30049 168 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 MYBPC3Q14896 1274 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 KHDC1Q4VXA5 237 aaKnown RBP8.38□□□□□ -1.07
CD46-201ENST00000322875 LRRC23Q53EV4 343 aaPredicted RBP8.38□□□□□ -1.07
CD46-201ENST00000322875 FAM26FQ5R3K3 315 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
CD46-201ENST00000322875 ERP27Q96DN0 273 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 MIPEPQ99797 713 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 DCP1AQ9NPI6 582 aaPredicted RBP8.38□□□□□ -1.07
CD46-201ENST00000322875 HDAC9Q9UKV0 1011 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 USH1CQ9Y6N9 552 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 MAGEA13PA6NCF6 341 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 FOXO6A8MYZ6 492 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 RANBP1P43487 201 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 CACNA2D1P54289 1103 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
CD46-201ENST00000322875 GSTA3Q16772 222 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 AADACL2Q6P093 401 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 OTUD6AQ7L8S5 288 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 HEATR3Q7Z4Q2 680 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 NELFCDQ8IXH7 590 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 DENND1AQ8TEH3 1009 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 C10orf82Q8WW14 230 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 DHX36Q9H2U1 1008 aaKnown RBP8.38□□□□□ -1.07
CD46-201ENST00000322875 PDP2Q9P2J9 529 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 ATXN10Q9UBB4 475 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 TRAF3IP3Q9Y228 551 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 SYNGAP1Q96PV0 1343 aa8.38□□□□□ -1.07
CD46-201ENST00000322875 KAT6BQ8WYB5 2073 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 ATP9AO75110 1047 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 ASMTLO95671 621 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 CETPP11597 493 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 PLCG2P16885 1265 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 PTPN4P29074 926 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 GSTT1P30711 240 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 SLC18A1P54219 525 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 POLE2P56282 527 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 ZNF211Q13398 564 aaPredicted RBP8.37□□□□□ -1.07
CD46-201ENST00000322875 GDAP1Q8TB36 358 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 TBCKQ8TEA7 893 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 ARHGEF26Q96DR7 871 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 NDNQ99608 321 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 PAIP2Q9BPZ3 127 aaKnown RBP8.37□□□□□ -1.07
CD46-201ENST00000322875 SPZ1Q9BXG8 430 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 GPR88Q9GZN0 384 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 PCDHGA4Q9Y5G9 962 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 NUMBLQ9Y6R0 609 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 ESYT2A0FGR8 921 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 GTPBP10A4D1E9 387 aaKnown RBP8.37□□□□□ -1.07
CD46-201ENST00000322875 SLC37A4O43826 429 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 BRAFP15056 766 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 HOXD13P35453 343 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 TXKP42681 527 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 USP4Q13107 963 aa8.37□□□□□ -1.07
CD46-201ENST00000322875 CNPY1Q3B7I2 92 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms