RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ADRB2P07550 413 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 IREB2P48200 963 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 IRX3P78415 501 aaPredicted RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 TTLL12Q14166 644 aaPredicted RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 PTPROQ16827 1216 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 C1orf220Q5T0J3 134 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 TMEM174Q8WUU8 243 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 POP1Q99575 1024 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 SPATC1LQ9H0A9 340 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 C17orf75Q9HAS0 396 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 XPNPEP1Q9NQW7 623 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 SEPT11Q9NVA2 429 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 ADGRA3Q8IWK6 1321 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 GRID2IPA4D2P6 1211 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 H2AFZP0C0S5 128 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 SUPT20HL2P0C7V6 817 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 PAFAH1B1P43034 410 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 MXI1P50539 228 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 ALDH5A1P51649 535 aaPredicted RBP8.21□□□□□ -1.09
IFT88-201ENST00000319980 SNRPFP62306 86 aaKnown RBP8.21□□□□□ -1.09
IFT88-201ENST00000319980 MRPS25P82663 173 aaKnown RBP8.21□□□□□ -1.09
IFT88-201ENST00000319980 XKR3Q5GH77 459 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 WDR93Q6P2C0 686 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 H2AFVQ71UI9 128 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 RIOX2Q8IUF8 465 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 MCPH1Q8NEM0 835 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 POMGNT1Q8WZA1 660 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 TMEM117Q9H0C3 514 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 ATP6V0A4Q9HBG4 840 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 L1RE1Q9UN81 338 aa8.21□□□□□ -1.09
IFT88-201ENST00000319980 CCDC172P0C7W6 258 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 ANXA13P27216 316 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 POLGP54098 1239 aaPredicted RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 RNASE9P60153 205 aaKnown RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 MAP2K1Q02750 393 aaPredicted RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 LNX1Q8TBB1 728 aaPredicted RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 BICD1Q96G01 975 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 IFT74Q96LB3 600 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 R3HDMLQ9H3Y0 253 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 ZNF302Q9NR11 478 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 PDLIM7Q9NR12 457 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 FBXO40Q9UH90 709 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 TSKSQ9UJT2 592 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 USP20Q9Y2K6 914 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 N4BP1O75113 896 aaKnown RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 ATP4AP20648 1035 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 ABCB4P21439 1286 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 USP8P40818 1118 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 CFAP221Q4G0U5 840 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 MEI1Q5TIA1 1274 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 C9orf131Q5VYM1 1079 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 SLC39A4Q6P5W5 647 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 ERO1BQ86YB8 467 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 ARHGEF19Q8IW93 802 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 TMEM143Q96AN5 459 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 LRRC1Q9BTT6 524 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 POLR3FQ9H1D9 316 aaPredicted RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
IFT88-201ENST00000319980 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
IFT88-201ENST00000319980 PHIPQ8WWQ0 1821 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 RLFQ13129 1914 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 BTNL10A8MVZ5 291 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 MAPK13O15264 365 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 P4HA2O15460 535 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 DLATP10515 647 aaKnown RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 UBA1P22314 1058 aaKnown RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 ICAM3P32942 547 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 GALCP54803 685 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 PPATQ06203 517 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 SMC1AQ14683 1233 aaKnown RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 IFI16Q16666 785 aaKnown RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 EPC2Q52LR7 807 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 CCDC70Q6NSX1 233 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 HDXQ7Z353 690 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 ANKRD13AQ8IZ07 590 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 PPM1KQ8N3J5 372 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 SLC30A5Q8TAD4 765 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 PARD3BQ8TEW8 1205 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 HDAC7Q8WUI4 952 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 KAT5Q92993 513 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 IGSF9BQ9UPX0 1349 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 A0A0G2JLL6 359 aaPredicted RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 TARSL2A2RTX5 802 aaKnown RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 MAP2K7O14733 419 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 PGK2P07205 417 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 HSPA6P17066 643 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 TNFAIP3P21580 790 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 RFX1P22670 979 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 NF2P35240 595 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 EMC2Q15006 297 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 BRDTQ58F21 947 aaPredicted RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 PRRT2Q7Z6L0 340 aaPredicted RBP8.2□□□□□ -1.1
IFT88-201ENST00000319980 PALB2Q86YC2 1186 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 FMNL3Q8IVF7 1028 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 ELMO3Q96BJ8 720 aa8.2□□□□□ -1.1
IFT88-201ENST00000319980 HVCN1Q96D96 273 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms