RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 BTBD6Q96KE9 485 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 NAP1L3Q99457 506 aaPredicted RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 CARD9Q9H257 536 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 ARHGEF3Q9NR81 526 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 CORO1CQ9ULV4 474 aaPredicted RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 ARL2BPQ9Y2Y0 163 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 FAM187AA6NFU0 413 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 SPDYE5A6NIY4 337 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 BRAFP15056 766 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TNFAIP3P21580 790 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 GALNTL6Q49A17 601 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TTBK2Q6IQ55 1244 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 REEP2Q9BRK0 252 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 ZCWPW1Q9H0M4 648 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 CDC42EP4Q9H3Q1 356 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 KLHL14Q9P2G3 628 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 DNAJC12Q9UKB3 198 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 PHF2O75151 1096 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 OAS1P00973 400 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 FERP16591 822 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 VCAM1P19320 739 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 ATP4AP20648 1035 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 PTGIRP43119 386 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 DHX34Q14147 1143 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 EDRF1Q3B7T1 1238 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 VSTM1Q6UX27 236 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TBC1D16Q8TBP0 767 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 STMN4Q9H169 189 aaPredicted RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 HAO1Q9UJM8 370 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 A0A0A6YYK5 440 aaPredicted RBP10.38□□□□□ -0.75
PTPRA-202ENST00000318266 JAM2P57087 298 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 MXRA7P84157 204 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 KYNUQ16719 465 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 SLC30A10Q6XR72 485 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 FRMD5Q7Z6J6 570 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 ECHDC2Q86YB7 292 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 FLAD1Q8NFF5 587 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 SLC20A1Q8WUM9 679 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 CNKSR1Q969H4 720 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 UTP4Q969X6 686 aaKnown RBP10.38□□□□□ -0.75
PTPRA-202ENST00000318266 ERP27Q96DN0 273 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 DHX36Q9H2U1 1008 aaKnown RBP10.38□□□□□ -0.75
PTPRA-202ENST00000318266 RXFP1Q9HBX9 757 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 LGR5O75473 907 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
PTPRA-202ENST00000318266 SOX5P35711 763 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 PPATQ06203 517 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 INTS8Q75QN2 995 aaKnown RBP10.38□□□□□ -0.75
PTPRA-202ENST00000318266 PRUNE1Q86TP1 453 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 C1orf54Q8WWF1 131 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 MRRFQ96E11 262 aaKnown RBP10.38□□□□□ -0.75
PTPRA-202ENST00000318266 ASIC3Q9UHC3 531 aa10.38□□□□□ -0.75
PTPRA-202ENST00000318266 PPP1R11O60927 126 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 TMEM253P0C7T8 217 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 PYGMP11217 842 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 GNAT1P11488 350 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CHKAP35790 457 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CYP2J2P51589 502 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 RPS8P62241 208 aaKnown RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 COG2Q14746 738 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 SLMAPQ14BN4 828 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CGB2Q6NT52 195 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 LONP2Q86WA8 852 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CYP4X1Q8N118 509 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 GBP7Q8N8V2 638 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 FBF1Q8TES7 1133 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 TSC22D3Q99576 134 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 RUSC1Q9BVN2 902 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 TRIM7Q9C029 511 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CCDC134Q9H6E4 229 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 NENFQ9UMX5 172 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 DLEC1Q9Y238 1755 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 RARGP13631 454 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 LMNB1P20700 586 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 SEPT2Q15019 361 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ZC2HC1CQ53FD0 456 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 SPIRE2Q8WWL2 714 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 MYLK2Q9H1R3 596 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ACP6Q9NPH0 428 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CPSF2Q9P2I0 782 aaKnown RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 TTC7AQ9ULT0 858 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CALUO43852 315 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ENTPD5O75356 428 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 SPAG7O75391 227 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 LUC7L3O95232 432 aaKnown RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 BAG3O95817 575 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 GM2AP17900 193 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 COMTP21964 271 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CHRNA3P32297 505 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 DNAJC3Q13217 504 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ITPK1Q13572 414 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms