RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CERKLQ49MI3 558 aaPredicted RBP20.6■□□□□ 0.89
RTN4-201ENST00000317610 SYDE2Q5VT97 1194 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 LRRC34Q8IZ02 419 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 TEKT1Q969V4 418 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 DYDC2Q96IM9 177 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 INTS9Q9NV88 658 aaKnown RBP20.6■□□□□ 0.89
RTN4-201ENST00000317610 SEPT11Q9NVA2 429 aaKnown RBP20.6■□□□□ 0.89
RTN4-201ENST00000317610 SPATA31A6Q5VVP1 1343 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 F5H6K3 240 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 PSMD10O75832 226 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 MTA2O94776 668 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 ZNF76P36508 570 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 ELF3P78545 371 aaPredicted RBP20.59■□□□□ 0.89
RTN4-201ENST00000317610 SLMAPQ14BN4 828 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 CHADLQ6NUI6 762 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 MORC4Q8TE76 937 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 SLC20A1Q8WUM9 679 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 STRA6Q9BX79 667 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 STMN4Q9H169 189 aaPredicted RBP20.59■□□□□ 0.89
RTN4-201ENST00000317610 KCND2Q9NZV8 630 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 TLDC2A0PJX2 215 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 KLRG2A4D1S0 409 aaPredicted RBP20.59■□□□□ 0.89
RTN4-201ENST00000317610 ATP2C2O75185 946 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 BCRP11274 1271 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 RARGP13631 454 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 SLC8A1P32418 973 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 MARCKSL1P49006 195 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 MFSD5Q6N075 450 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 TPH2Q8IWU9 490 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 FAM178BQ8IXR5 827 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 RUNDC3BQ96NL0 473 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 CTTNBP2NLQ9P2B4 639 aa20.59■□□□□ 0.89
RTN4-201ENST00000317610 RIPK2O43353 540 aa20.58■□□□□ 0.89
RTN4-201ENST00000317610 FTLP02792 175 aaPredicted RBP20.58■□□□□ 0.89
RTN4-201ENST00000317610 GYS1P13807 737 aa20.58■□□□□ 0.89
RTN4-201ENST00000317610 HOXA13P31271 388 aaPredicted RBP20.58■□□□□ 0.89
RTN4-201ENST00000317610 GPC5P78333 572 aa20.58■□□□□ 0.89
RTN4-201ENST00000317610 UBAP2Q5T6F2 1119 aaKnown RBP20.58■□□□□ 0.89
RTN4-201ENST00000317610 CD101Q93033 1021 aa20.58■□□□□ 0.89
RTN4-201ENST00000317610 ART4Q93070 314 aa20.58■□□□□ 0.89
RTN4-201ENST00000317610 WDR18Q9BV38 432 aa20.58■□□□□ 0.89
RTN4-201ENST00000317610 MYH11P35749 1972 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 LRRN2O75325 713 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 NDUFB10O96000 172 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 ICA1Q05084 483 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 MSL1Q68DK7 614 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 CCDC137Q6PK04 289 aaKnown RBP20.58■□□□□ 0.88
RTN4-201ENST00000317610 CYFIP1Q7L576 1253 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 TEX2Q8IWB9 1127 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 GIMAP7Q8NHV1 300 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 SLC5A5Q92911 643 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 WNT8AQ9H1J5 351 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 SAMD15Q9P1V8 674 aa20.58■□□□□ 0.88
RTN4-201ENST00000317610 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
RTN4-201ENST00000317610 FAM196BA6NMK8 535 aa20.57■□□□□ 0.88
RTN4-201ENST00000317610 AUHQ13825 339 aaKnown RBP20.57■□□□□ 0.88
RTN4-201ENST00000317610 ZNF568Q3ZCX4 644 aa20.57■□□□□ 0.88
RTN4-201ENST00000317610 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
RTN4-201ENST00000317610 EPS8L3Q8TE67 593 aaKnown RBP20.57■□□□□ 0.88
RTN4-201ENST00000317610 PRMT1Q99873 361 aaKnown RBP20.57■□□□□ 0.88
RTN4-201ENST00000317610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 ZBTB39O15060 712 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 TAL1P17542 331 aaPredicted RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 COMTP21964 271 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 CNGA2Q16280 664 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 SEL1L2Q5TEA6 688 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 LRCH2Q5VUJ6 765 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 ROPN1BQ9BZX4 212 aaPredicted RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 NSRP1Q9H0G5 558 aaKnown RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 ROPN1Q9HAT0 212 aaPredicted RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 PI4KBQ9UBF8 816 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 AFF2P51816 1311 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 P4HA2O15460 535 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 RTN2O75298 545 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 ATP6V1G2O95670 118 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 ELF1P32519 619 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 PRELPP51888 382 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 C12orf50Q8NA57 414 aaPredicted RBP20.56■□□□□ 0.88
RTN4-201ENST00000317610 TMEM174Q8WUU8 243 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 SCLT1Q96NL6 688 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 NACC1Q96RE7 527 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 MTFR1LQ9H019 292 aa20.56■□□□□ 0.88
RTN4-201ENST00000317610 DDTLA6NHG4 134 aaPredicted RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 TULP1O00294 542 aaPredicted RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 RASGRF2O14827 1237 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 EXOC3O60645 756 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 OAS1P00973 400 aaKnown RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 FGFR4P22455 802 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 NF2P35240 595 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 COILP38432 576 aaPredicted RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 RIPK1Q13546 671 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 SIX1Q15475 284 aaPredicted RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 ODR4Q5SWX8 454 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 TAOK1Q7L7X3 1001 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 TRPM8Q7Z2W7 1104 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms