RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 COL15A1P39059 1388 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 PTPRZ1P23471 2315 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 MED12LQ86YW9 2145 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 CCDC78A2IDD5 438 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 KPNA7A9QM74 516 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 F8W8V4 182 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 KRT8P05787 483 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ZNF12P17014 697 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 CA4P22748 312 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 BASP1P80723 227 aaKnown RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 RCN2Q14257 317 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 GCKRQ14397 625 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 TC2NQ8N9U0 490 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ZKSCAN4Q969J2 545 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ZSCAN10Q96SZ4 725 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 TMEM206Q9H813 350 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 MAGEE1Q9HCI5 957 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 SERTAD1Q9UHV2 236 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ANAPC5Q9UJX4 755 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 NUB1Q9Y5A7 615 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 P4HA2O15460 535 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 STX3Q13277 289 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 SGO2Q562F6 1265 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ALDH16A1Q8IZ83 802 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 DHX38Q92620 1227 aaKnown RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 STAMQ92783 540 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 CLMNQ96JQ2 1002 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 UNC45AQ9H3U1 944 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 RNPEPL1Q9HAU8 725 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 MATN2O00339 956 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ENC1O14682 589 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ZPR1O75312 459 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 RBM5P52756 815 aaKnown RBP eCLIP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 NAALADL2Q58DX5 795 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 PBXIP1Q96AQ6 731 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 OLFM1Q99784 485 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 SUGCTQ9HAC7 445 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 SPC25Q9HBM1 224 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 SAP30BPQ9UHR5 308 aaKnown RBP4.8□□□□□ -1.64
CNOT1-201ENST00000317147 LAMB1P07942 1786 aa4.8□□□□□ -1.64
CNOT1-201ENST00000317147 ARFGEF1Q9Y6D6 1849 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 LAMB4A4D0S4 1761 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 KIAA0391O15091 583 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SRGAP2BP0DMP2 458 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ATF3P18847 181 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PSMA4P25789 261 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PTPN4P29074 926 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 DRG2P55039 364 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CENPCQ03188 943 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 FAM26FQ5R3K3 315 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 COPS6Q7L5N1 327 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 HDDC2Q7Z4H3 204 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CEP70Q8NHQ1 597 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 LPIN2Q92539 896 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ZNF512BQ96KM6 892 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 EYA1Q99502 592 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 XAB2Q9HCS7 855 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CYP26B1Q9NR63 512 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 BAG5Q9UL15 447 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CDY2AQ9Y6F7 541 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CDY1Q9Y6F8 540 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PLEKHG3A1L390 1219 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 MYO1FO00160 1098 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 GNAT1P11488 350 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RPL22P35268 128 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 EIF4A3P38919 411 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 MFAP3P55082 362 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 LACTB2Q53H82 288 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 FRMD5Q7Z6J6 570 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RSPH1Q8WYR4 309 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CCSER1Q9C0I3 900 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 STOML2Q9UJZ1 356 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PJA2O43164 708 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TOMM70O94826 608 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CALB1P05937 261 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 HMOX2P30519 316 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CXCR5P32302 372 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 GUCY1A3Q02108 690 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PDAP1Q13442 181 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 EP400NLQ6ZTU2 488 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 USP38Q8NB14 1042 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PDPRQ8NCN5 879 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 GIPC2Q8TF65 315 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 STK32AQ8WU08 396 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ABTB1Q969K4 478 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 FAR2Q96K12 515 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SLC24A3Q9HC58 644 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PSMC3IPQ9P2W1 217 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RABGEF1Q9UJ41 708 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TMED5Q9Y3A6 229 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ARFGEF2Q9Y6D5 1785 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ABCA4P78363 2273 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SH2B2O14492 632 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TTLL1O95922 423 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 APOEP02649 317 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 FGGP02679 453 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms