RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 RNF219Q5W0B1 726 aaPredicted RBP13.54□□□□□ -0.24
LAMA3-202ENST00000313654 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 KRT84Q9NSB2 600 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 KLHL8Q9P2G9 620 aaPredicted RBP13.54□□□□□ -0.24
LAMA3-202ENST00000313654 NEMP1O14524 444 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 CAND2O75155 1236 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 HPCAP84074 193 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 TFAMQ00059 246 aaKnown RBP13.54□□□□□ -0.24
LAMA3-202ENST00000313654 CCSAPQ6IQ19 270 aaPredicted RBP13.54□□□□□ -0.24
LAMA3-202ENST00000313654 DPP10Q8N608 796 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 EIF2S3LQ2VIR3 472 aaKnown RBP13.54□□□□□ -0.24
LAMA3-202ENST00000313654 DAPK2Q9UIK4 370 aa13.54□□□□□ -0.24
LAMA3-202ENST00000313654 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SYTL3Q4VX76 610 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 CYP4A22Q5TCH4 519 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 IL1RAPL1Q9NZN1 696 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 FKBP9O95302 570 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 FKBP9P1Q75LS8 142 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 UNC45AQ9H3U1 944 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 ULK3Q6PHR2 472 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 VN1R5Q7Z5H4 357 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 METTL23Q86XA0 190 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 AGGF1Q8N302 714 aaeCLIP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 TAB1Q15750 504 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 USP39Q53GS9 565 aaKnown RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 CAPSLQ8WWF8 208 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 EPS8L2Q9H6S3 715 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 ENO3P13929 434 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SESN2P58004 480 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 TTC7AQ9ULT0 858 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SAC3D1A6NKF1 404 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SERPING1P05155 500 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 MAGEF1Q9HAY2 307 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 C8orf4Q9NR00 106 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 SDE2Q6IQ49 451 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 WWP1Q9H0M0 922 aa13.53□□□□□ -0.24
LAMA3-202ENST00000313654 IZUMO1Q8IYV9 350 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 PPM1NQ8N819 430 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 KIF2BQ8N4N8 673 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 CDYLQ9Y232 598 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 VMP1Q96GC9 406 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 DNAJC7Q99615 494 aa13.52□□□□□ -0.24
LAMA3-202ENST00000313654 MARCOQ9UEW3 520 aaPredicted RBP13.52□□□□□ -0.24
LAMA3-202ENST00000313654 PALMO75781 387 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 DNAL1Q4LDG9 190 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 CHSY1Q86X52 802 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 THTPAQ9BU02 230 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 USP40Q9NVE5 1235 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 AREL1O15033 823 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 ALDH6A1Q02252 535 aaKnown RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 MAGEB5Q9BZ81 275 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 NDFIP2Q9NV92 336 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 PODXLO00592 558 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 HSPA2P54652 639 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 DGKKQ5KSL6 1271 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 ARPP21Q9UBL0 812 aaPredicted RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 HEXIM2Q96MH2 286 aaKnown RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 GCNAQ96QF7 691 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 AIM2O14862 343 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 SRGAP2O75044 1071 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 PPIDQ08752 370 aaKnown RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 TOGARAM2Q6ZUX3 1019 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 CAAP1Q9H8G2 361 aa13.52□□□□□ -0.25
LAMA3-202ENST00000313654 IARS2Q9NSE4 1012 aaKnown RBP13.52□□□□□ -0.25
LAMA3-202ENST00000313654 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
LAMA3-202ENST00000313654 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
LAMA3-202ENST00000313654 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
LAMA3-202ENST00000313654 KIAA0408Q6ZU52 694 aa13.51□□□□□ -0.25
LAMA3-202ENST00000313654 KRCC1Q9NPI7 259 aaPredicted RBP13.51□□□□□ -0.25
LAMA3-202ENST00000313654 HPCAL4Q9UM19 191 aa13.51□□□□□ -0.25
LAMA3-202ENST00000313654 VSNL1P62760 191 aa13.51□□□□□ -0.25
LAMA3-202ENST00000313654 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
LAMA3-202ENST00000313654 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
LAMA3-202ENST00000313654 LAYNQ6UX15 382 aa13.51□□□□□ -0.25
LAMA3-202ENST00000313654 SPATA21Q7Z572 469 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms