RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 NT5C1B-RDH14C9J2C7 533 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 E9PMD0 336 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 TNFRSF10AO00220 468 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 ZC3H11AO75152 810 aaKnown RBP eCLIP18.07■□□□□ 0.48
LSM1-201ENST00000311351 TBX10O75333 385 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 OFD1O75665 1012 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 IL9P15248 144 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 ARF4P18085 180 aaPredicted RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 CYP11B2P19099 503 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 LTBRP36941 435 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 NRIP1P48552 1158 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 AFF1P51825 1210 aaKnown RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 POU5F1BQ06416 359 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 CLUL1Q15846 466 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 NOMO2Q5JPE7 1267 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 PLPP4Q5VZY2 271 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 NOTUMQ6P988 496 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 DTHD1Q6ZMT9 781 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 CDR2LQ86X02 465 aaPredicted RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 SLC39A11Q8N1S5 342 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 SMG8Q8ND04 991 aaKnown RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 MICAL1Q8TDZ2 1067 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 MRPS27Q92552 414 aaKnown RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 PGBD4Q96DM1 585 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 MMTAG2Q9BU76 263 aaKnown RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 NFKBIZQ9BYH8 718 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 GBP3Q9H0R5 595 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 HES2Q9Y543 173 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
LSM1-201ENST00000311351 TDRD15B5MCY1 1934 aaKnown RBP18.07■□□□□ 0.48
LSM1-201ENST00000311351 FSCN2O14926 492 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 AXLP30530 894 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 PPM1AP35813 382 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 BCAR1P56945 870 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 PLCB3Q01970 1234 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 CTC1Q2NKJ3 1217 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 CDCA2Q69YH5 1023 aaPredicted RBP18.06■□□□□ 0.48
LSM1-201ENST00000311351 PTCRAQ6ISU1 281 aaPredicted RBP18.06■□□□□ 0.48
LSM1-201ENST00000311351 KCNK18Q7Z418 384 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 TMEM173Q86WV6 379 aaPredicted RBP18.06■□□□□ 0.48
LSM1-201ENST00000311351 KIFC3Q9BVG8 833 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 CSRNP2Q9H175 543 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 NRDE2Q9H7Z3 1164 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 SPG21Q9NZD8 308 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 DNAJB4Q9UDY4 337 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 IPPQ9Y573 584 aa18.06■□□□□ 0.48
LSM1-201ENST00000311351 CNTNAP2Q9UHC6 1331 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 VWA3AA6NCI4 1184 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 TTLL13PA6NNM8 815 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 PER2O15055 1255 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
LSM1-201ENST00000311351 RNASELQ05823 741 aaKnown RBP18.05■□□□□ 0.48
LSM1-201ENST00000311351 PCBP1Q15365 356 aaKnown RBP eCLIP18.05■□□□□ 0.48
LSM1-201ENST00000311351 ZRSR1Q15695 479 aaKnown RBP18.05■□□□□ 0.48
LSM1-201ENST00000311351 ZBTB8OSQ8IWT0 167 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 BCL7CQ8WUZ0 217 aaPredicted RBP18.05■□□□□ 0.48
LSM1-201ENST00000311351 PPP2R3CQ969Q6 453 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 CCDC51Q96ER9 411 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 TCF25Q9BQ70 676 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 APOL6Q9BWW8 343 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 NXF3Q9H4D5 531 aaKnown RBP18.05■□□□□ 0.48
LSM1-201ENST00000311351 ENTPD7Q9NQZ7 604 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 LZTS1Q9Y250 596 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 STK24Q9Y6E0 443 aa18.05■□□□□ 0.48
LSM1-201ENST00000311351 MYH11P35749 1972 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 NPTXRO95502 500 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 GLP2RO95838 553 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 EDN1P05305 212 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 ITGA4P13612 1032 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 LIG1P18858 919 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 MLH1P40692 756 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 NAMPTP43490 491 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 NDUFV1P49821 464 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 RBM10P98175 930 aaKnown RBP18.04■□□□□ 0.48
LSM1-201ENST00000311351 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
LSM1-201ENST00000311351 ZNF280BQ86YH2 543 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 URGCPQ8TCY9 931 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 RSPH1Q8WYR4 309 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 RUSC1Q9BVN2 902 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 USP20Q9Y2K6 914 aa18.04■□□□□ 0.48
LSM1-201ENST00000311351 GRXCR2A6NFK2 248 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 HIDE1A8MVS5 230 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 NCK2O43639 380 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 EYA4O95677 639 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 POMCP01189 267 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 SLC11A1P49279 550 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 ALDH7A1P49419 539 aaKnown RBP18.03■□□□□ 0.48
LSM1-201ENST00000311351 KRT17Q04695 432 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 ADAM15Q13444 863 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 BRAPQ7Z569 592 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 EFHBQ8N7U6 833 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 VN1R2Q8NFZ6 395 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 DEPTORQ8TB45 409 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 PNMA5Q96PV4 448 aa18.03■□□□□ 0.48
LSM1-201ENST00000311351 PLIN2Q99541 437 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms