RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PON1P27169 355 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 GALCP54803 685 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 RASA3Q14644 834 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 LONRF1Q17RB8 773 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 ARHGEF16Q5VV41 709 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 KAZNQ674X7 775 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 KDM7AQ6ZMT4 941 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 CPNE8Q86YQ8 564 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 LRRC34Q8IZ02 419 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 SUPT20HQ8NEM7 779 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 MCUR1Q96AQ8 359 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 TEKT3Q9BXF9 490 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 HEMGNQ9BXL5 484 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 UNC45AQ9H3U1 944 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 NOP53Q9NZM5 478 aaKnown RBP13.61□□□□□ -0.23
RETREG3-201ENST00000309428 RNF14Q9UBS8 474 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 SPATA31C1P0DKV0 1188 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 TNNI1P19237 187 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 QPCTQ16769 361 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 MTERF2Q49AM1 385 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CBWD6Q4V339 395 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CBWD3Q5JTY5 395 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CBWD5Q5RIA9 395 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CAPRIN2Q6IMN6 1127 aaKnown RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 USP38Q8NB14 1042 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 ECT2Q9H8V3 914 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 NID2Q14112 1375 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 RPS6KA5O75582 802 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 NOL4O94818 638 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 ALDH3A1P30838 453 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 PSMC2P35998 433 aaKnown RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 MTMR2Q13614 643 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CUL1Q13616 776 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 TMED2Q15363 201 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 SLC18A3Q16572 532 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 LONP2Q86WA8 852 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 PPP1R13LQ8WUF5 828 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 CHURC1Q8WUH1 139 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 XPO6Q96QU8 1125 aaKnown RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 KIF9Q9HAQ2 790 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 FAM114A2Q9NRY5 505 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 BAG2O95816 211 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 SMTNP53814 917 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 SLC29A2Q14542 456 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 HHATQ5VTY9 493 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 HHIPL2Q6UWX4 724 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 SEPT14Q6ZU15 432 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 POMGNT1Q8WZA1 660 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 PRCCQ92733 491 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 STMN2Q93045 179 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 TTYH3Q9C0H2 523 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 ZNF70Q9UC06 446 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-201ENST00000309428 USH1CQ9Y6N9 552 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 SMCHD1A6NHR9 2005 aa13.6□□□□□ -0.23
RETREG3-201ENST00000309428 MYH15Q9Y2K3 1946 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 PMS2P54278 862 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.59□□□□□ -0.237e-6■■□□□ 11.5
RETREG3-201ENST00000309428 WRAP73Q9P2S5 460 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-201ENST00000309428 GRID2IPA4D2P6 1211 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 FOXN3O00409 490 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-201ENST00000309428 TXNDC9O14530 226 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 CYP26A1O43174 497 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 GBP1P32455 592 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 TRIM59Q8IWR1 403 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 FUKQ8N0W3 1084 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 HAUS1Q96CS2 278 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 TAAR1Q96RJ0 339 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 RMDN3Q96TC7 470 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-201ENST00000309428 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 RPA1P27694 616 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 CETN2P41208 172 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
RETREG3-201ENST00000309428 MEA1Q16626 185 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 TMEM119Q4V9L6 283 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 SYCP2LQ5T4T6 812 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 RBM46Q8TBY0 533 aaKnown RBP13.59□□□□□ -0.23
RETREG3-201ENST00000309428 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 PBKQ96KB5 322 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 CEP170P1Q96L14 293 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
RETREG3-201ENST00000309428 LRRIQ4A6NIV6 560 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms