RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CPB2Q96IY4 423 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 BACH2Q9BYV9 841 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 RNF39Q9H2S5 420 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 IGFLR1Q9H665 355 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 SPG21Q9NZD8 308 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 TTLL13PA6NNM8 815 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 HIDE1A8MVS5 230 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 NT5C1B-RDH14C9J2C7 533 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 EDN1P05305 212 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 CYP11B2P19099 503 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 PPM1AP35813 382 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 PRPHP41219 470 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 ATP2C1P98194 919 aaPredicted RBP22■■□□□ 1.11
PDZRN3-202ENST00000308537 TFDP1Q14186 410 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 DUSP6Q16828 381 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 GLB1LQ6UWU2 654 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 MAEAQ7L5Y9 396 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 RBM23Q86U06 439 aaKnown RBP22■■□□□ 1.11
PDZRN3-202ENST00000308537 ZNF280BQ86YH2 543 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 MCPH1Q8NEM0 835 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 ERMNQ8TAM6 284 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 VN1R3Q9BXE9 311 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 DNAJB4Q9UDY4 337 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 LRWD1Q9UFC0 647 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 KIF3AQ9Y496 699 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 IPPQ9Y573 584 aa22■■□□□ 1.11
PDZRN3-202ENST00000308537 INO80B-WBP1J3KQ70 363 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 LAD1O00515 517 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 PER2O15055 1255 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 MBTPS2O43462 519 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 DDHD2O94830 711 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 EYA4O95677 639 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 GALTP07902 379 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 CDC25AP30304 524 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 AXLP30530 894 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 PUS10Q3MIT2 529 aaKnown RBP21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 HAUS3Q68CZ6 603 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 PPP4R3CPQ6ZMV5 832 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 CCDC51Q96ER9 411 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 CSRNP2Q9H175 543 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 FZD8Q9H461 694 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 RSAD1Q9HA92 442 aa21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 TDRD15B5MCY1 1934 aaKnown RBP21.99■■□□□ 1.11
PDZRN3-202ENST00000308537 A0A1B0GUA9 196 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 ERLIN2O94905 339 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 CCT6AP40227 531 aaKnown RBP21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 SMAD2Q15796 467 aaKnown RBP21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 CLUL1Q15846 466 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 RILPL1Q5EBL4 403 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 PDE12Q6L8Q7 609 aaKnown RBP21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 NOTUMQ6P988 496 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 EP400NLQ6ZTU2 488 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 KCNK18Q7Z418 384 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 PGBD4Q96DM1 585 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 CCDC43Q96MW1 224 aaKnown RBP21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 TCF25Q9BQ70 676 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 CCDC113Q9H0I3 377 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 BHMT2Q9H2M3 363 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 KIAA1024Q9UPX6 916 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 INPP5FQ9Y2H2 1132 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 HES2Q9Y543 173 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 CNTNAP2Q9UHC6 1331 aa21.98■■□□□ 1.11
PDZRN3-202ENST00000308537 C19orf67A6NJJ6 358 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 ZC3H11AO75152 810 aaKnown RBP eCLIP21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 SLC11A1P49279 550 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 ZP2Q05996 745 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 COASYQ13057 564 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 FAM187BQ17R55 369 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 PLPP4Q5VZY2 271 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 MCTP1Q6DN14 999 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 TMEM184AQ6ZMB5 413 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 CDR2LQ86X02 465 aaPredicted RBP21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 DAW1Q8N136 415 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 SMRP1Q8NCR6 262 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 GSTCDQ8NEC7 633 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 SNX29Q8TEQ0 813 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 PPP2R3CQ969Q6 453 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 IGSF21Q96ID5 467 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 TLE6Q9H808 572 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 POLD4Q9HCU8 107 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 DDX19AQ9NUU7 478 aaKnown RBP21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 MIOSQ9NXC5 875 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 BARX2Q9UMQ3 279 aaPredicted RBP21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 SMC3Q9UQE7 1217 aa21.97■■□□□ 1.11
PDZRN3-202ENST00000308537 EFEMP2O95967 443 aa21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 SMAD4Q13485 552 aaKnown RBP21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 MICAL1Q8TDZ2 1067 aa21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 ZBP1Q9H171 429 aa21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 NXF3Q9H4D5 531 aaKnown RBP21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 NGRNQ9NPE2 291 aaKnown RBP21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 CD207Q9UJ71 328 aa21.96■■□□□ 1.11
PDZRN3-202ENST00000308537 ARHGEF35A5YM69 484 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 C2orf71A6NGG8 1288 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 LRRIQ4A6NIV6 560 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 E9PMD0 336 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 ALDH7A1P49419 539 aaKnown RBP21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 DSC1Q08554 894 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 HYIQ5T013 277 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 MRPL43Q8N983 215 aaKnown RBP21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 CNNM3Q8NE01 707 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms