RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ARHGEF16Q5VV41 709 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 DNAJC19Q96DA6 116 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 NT5C3AQ9H0P0 336 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 BHMT2Q9H2M3 363 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 EHMT1Q9H9B1 1298 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 WRAP73Q9P2S5 460 aaPredicted RBP11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 COL4A3BPQ9Y5P4 624 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 PHIPQ8WWQ0 1821 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 GOLGA6L7A0A1B0GV03 622 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 GOLGA6L10A6NI86 522 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 SFI1A8K8P3 1242 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLITRK3O94933 977 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 KRT18P05783 430 aaKnown RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 PECAM1P16284 738 aaPredicted RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 RPA1P27694 616 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 GUCY2FP51841 1108 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 SNCBQ16143 134 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZCWPW2Q504Y3 356 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ERMNQ8TAM6 284 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC5A5Q92911 643 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 PBKQ96KB5 322 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC24A3Q9HC58 644 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 AIPL1Q9NZN9 384 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 BTBD7Q9P203 1132 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 DNM3Q9UQ16 869 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 KDM3AQ9Y4C1 1321 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 H0YGN5 161 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 RAD51CO43502 376 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 COQ9O75208 318 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 GNA14O95837 355 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 CYP11B2P19099 503 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 KLRC1P26715 233 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 CCNHP51946 323 aaPredicted RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 FSTL1Q12841 308 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 BIRC3Q13489 604 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 TKFCQ3LXA3 575 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 HYIQ5T013 277 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ANKRD13AQ8IZ07 590 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZNF526Q8TF50 670 aaPredicted RBP11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 LRRC45Q96CN5 670 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 OPTNQ96CV9 577 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 PDCD2LQ9BRP1 358 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 PXMP2Q9NR77 195 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 PANK4Q9NVE7 773 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 ADAMTS5Q9UNA0 930 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 NFS1Q9Y697 457 aa11.17□□□□□ -0.62
APOBEC3F-201ENST00000308521 RLFQ13129 1914 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RSPH10B2B2RC85 870 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 FTCDO95954 541 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RSPH10BP0C881 870 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 MYZAPP0CAP1 466 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC12A3P55017 1021 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 CNTN2Q02246 1040 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 SP4Q02446 784 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 MTMR1Q13613 665 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 AGBL2Q5U5Z8 902 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 MAATS1Q7Z4T9 603 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 TAF4BQ92750 862 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RSRC1Q96IZ7 334 aaKnown RBP11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 TELO2Q9Y4R8 837 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 ATP8B3O60423 1300 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RPTORQ8N122 1335 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 COASYQ13057 564 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 CCDC40Q4G0X9 1142 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 HERC4Q5GLZ8 1057 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 CDCA2Q69YH5 1023 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 NELFCDQ8IXH7 590 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 HSD17B14Q9BPX1 270 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 CD248Q9HCU0 757 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 NLRC4Q9NPP4 1024 aa11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 BMP2KQ9NSY1 1161 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3F-201ENST00000308521 GMNCA6NCL1 334 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 PAEPP09466 180 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 ECHS1P30084 290 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 GCKP35557 465 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 HSD17B3P37058 310 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 SEC24CP53992 1094 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 RPS6KA1Q15418 735 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 IFI16Q16666 785 aaKnown RBP11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 RNF187Q5TA31 235 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms