RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 PADI6Q6TGC4 694 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 TMC7Q7Z402 723 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 MCPH1Q8NEM0 835 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 URGCPQ8TCY9 931 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 SNX29Q8TEQ0 813 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 APOL6Q9BWW8 343 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 RAB34Q9BZG1 259 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 RSAD1Q9HA92 442 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 FAM50BQ9Y247 325 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 B4GALT5O43286 388 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 LIG1P18858 919 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 RBM10P98175 930 aaKnown RBP18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 ECM1Q16610 540 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 AGMOQ6ZNB7 445 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 CDR2LQ86X02 465 aaPredicted RBP18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 EFHBQ8N7U6 833 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 TMEM169Q96HH4 297 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 EIF2AQ9BY44 585 aaKnown RBP18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 TRIM6Q9C030 488 aaPredicted RBP18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 POLD4Q9HCU8 107 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 CD207Q9UJ71 328 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 BARX2Q9UMQ3 279 aaPredicted RBP18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 KIAA1024Q9UPX6 916 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 LZTS1Q9Y250 596 aa18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.89■□□□□ 0.61
HMGCLL1-202ENST00000308161 PP2D1A8MPX8 630 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 ITGA4P13612 1032 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 ZRSR1Q15695 479 aaKnown RBP18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 TMEM132AQ24JP5 1023 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 TMEM173Q86WV6 379 aaPredicted RBP18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 BHMT2Q9H2M3 363 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 NRDE2Q9H7Z3 1164 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 CD320Q9NPF0 282 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 DDX19AQ9NUU7 478 aaKnown RBP18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 DNAJB4Q9UDY4 337 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 HES2Q9Y543 173 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 IPPQ9Y573 584 aa18.88■□□□□ 0.61
HMGCLL1-202ENST00000308161 HIDE1A8MVS5 230 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 FSCN2O14926 492 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 GLP2RO95838 553 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 POMCP01189 267 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 ARF4P18085 180 aaPredicted RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 CDC25AP30304 524 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 AXLP30530 894 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 POU5F1BQ06416 359 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 PCBP1Q15365 356 aaKnown RBP eCLIP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 RILPL1Q5EBL4 403 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 LARP1BQ659C4 914 aaKnown RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 PDE12Q6L8Q7 609 aaKnown RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 LLGL2Q6P1M3 1020 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 DTHD1Q6ZMT9 781 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 MRPL10Q7Z7H8 261 aaKnown RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 IFNLR1Q8IU57 520 aaPredicted RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 ZBTB8OSQ8IWT0 167 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 GJD3Q8N144 294 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 SMG8Q8ND04 991 aaKnown RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 CCDC51Q96ER9 411 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 FAM193BQ96PV7 902 aaPredicted RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 CSRNP2Q9H175 543 aa18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.87■□□□□ 0.61
HMGCLL1-202ENST00000308161 CNTNAP2Q9UHC6 1331 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 LAD1O00515 517 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 MBTPS2O43462 519 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 NPTXRO95502 500 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 CYP11B2P19099 503 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 SLC11A1P49279 550 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 SMAD4Q13485 552 aaKnown RBP18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 IL17AQ16552 155 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 AMHR2Q16671 573 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 DUSP6Q16828 381 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 KRT79Q5XKE5 535 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 IGSF22Q8N9C0 903 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 CNNM3Q8NE01 707 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 DEPTORQ8TB45 409 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 RSPH1Q8WYR4 309 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 BSNDQ8WZ55 320 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 NXF3Q9H4D5 531 aaKnown RBP18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 NGRNQ9NPE2 291 aaKnown RBP18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 CLEC1BQ9P126 229 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 C5orf42Q9H799 3197 aa18.86■□□□□ 0.61
HMGCLL1-202ENST00000308161 B4GALT3O60512 393 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 DDHD2O94830 711 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 GALTP07902 379 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 MUTP22033 750 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 MLH1P40692 756 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 PDIA5Q14554 519 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 SMC1AQ14683 1233 aaKnown RBP18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 VPS52Q8N1B4 723 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 TMEM87AQ8NBN3 555 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 VN1R2Q8NFZ6 395 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 BCL7CQ8WUZ0 217 aaPredicted RBP18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 AUTS2Q8WXX7 1259 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 GAD1Q99259 594 aa18.85■□□□□ 0.61
HMGCLL1-202ENST00000308161 KIFC3Q9BVG8 833 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms