RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 ARHGEF18Q6ZSZ5 1173 aa20.27■□□□□ 0.83
CHRNB1-201ENST00000306071 LONP2Q86WA8 852 aa20.27■□□□□ 0.83
CHRNB1-201ENST00000306071 GRAMD1AQ96CP6 724 aa20.27■□□□□ 0.83
CHRNB1-201ENST00000306071 NIP7Q9Y221 180 aaKnown RBP eCLIP20.27■□□□□ 0.83
CHRNB1-201ENST00000306071 TRAF3IP3Q9Y228 551 aa20.27■□□□□ 0.83
CHRNB1-201ENST00000306071 ASB3Q9Y575 518 aa20.27■□□□□ 0.83
CHRNB1-201ENST00000306071 COL4A1P02462 1669 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 CALUO43852 315 aaPredicted RBP20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 CASP4P49662 377 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 SGSM1Q2NKQ1 1148 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 PPP1R15BQ5SWA1 713 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 ASAP3Q8TDY4 903 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 SLC35C1Q96A29 364 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 PAIP2Q9BPZ3 127 aaKnown RBP20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 TAS2R14Q9NYV8 317 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 TFCP2L1Q9NZI6 479 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 TBK1Q9UHD2 729 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 TTLL1O95922 423 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 ACADSP16219 412 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 TNFAIP3P21580 790 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 KCNJ1P48048 391 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 SLC5A9Q2M3M2 681 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 SEL1L2Q5TEA6 688 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 SEPT14Q6ZU15 432 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 ZDHHC14Q8IZN3 488 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 VCXQ9H320 206 aa20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 METTL14Q9HCE5 456 aaKnown RBP20.26■□□□□ 0.83
CHRNB1-201ENST00000306071 RASA1P20936 1047 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 SP100P23497 879 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 RFC5P40937 340 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 NT5C2P49902 561 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 STRN3Q13033 797 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 CTTNQ14247 550 aaKnown RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 PARP10Q53GL7 1025 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 CMPK2Q5EBM0 449 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 CYFIP1Q7L576 1253 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 OLIG1Q8TAK6 271 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 SH3RF3Q8TEJ3 882 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 LRRC37BQ96QE4 947 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 TRIM4Q9C037 500 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 CTTNBP2NLQ9P2B4 639 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 MINPP1Q9UNW1 487 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 PCDHB13Q9Y5F0 798 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 MIF4GDA9UHW6 222 aaKnown RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 COILP38432 576 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 POLGP54098 1239 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 EVA1CP58658 441 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 DRAP1Q14919 205 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 TNIP1Q15025 636 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 UBE2SQ16763 222 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 RNF220Q5VTB9 566 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 FBXO33Q7Z6M2 555 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 SRRM1Q8IYB3 904 aaKnown RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 TTC8Q8TAM2 541 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 KIAA1683Q9H0B3 1180 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 WDR35Q9P2L0 1181 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 MTUS1Q9ULD2 1270 aa20.25■□□□□ 0.83
CHRNB1-201ENST00000306071 NTSR2O95665 410 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 NR3C1P04150 777 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ALAS1P13196 640 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 LAMB3Q13751 1172 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ARSHQ5FYA8 562 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ZNF449Q6P9G9 518 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 MTHFD1LQ6UB35 978 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 APBB1IPQ7Z5R6 666 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 SUPT20HQ8NEM7 779 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 TBC1D10AQ9BXI6 508 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 DNAJC17Q9NVM6 304 aaKnown RBP20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 TCRBV7S2A1N4TA0A589 114 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ANKRD62A6NC57 917 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 CLIC2O15247 247 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 TAC1P20366 129 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 EPHB2P29323 1055 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 POLE2P56282 527 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ENDOVQ8N8Q3 282 aaKnown RBP20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ZFAND2BQ8WV99 257 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 ZSWIM1Q9BR11 485 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 DNAJC12Q9UKB3 198 aa20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-201ENST00000306071 USP17L5A8MUK1 530 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 ENTPD5O75356 428 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 RPL13P26373 211 aaKnown RBP20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 SESN3P58005 492 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 HYIQ5T013 277 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 SFR1Q86XK3 245 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 POP1Q99575 1024 aaKnown RBP20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 FRMPD2Q68DX3 1309 aaPredicted RBP20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 PDXKO00764 312 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 MAPK13O15264 365 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 HIBADHP31937 336 aaKnown RBP20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 FOXN2P32314 431 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 HOXD13P35453 343 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 PALB2Q86YC2 1186 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 RBBP8NLQ8NC74 664 aaPredicted RBP20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 TGFBRAP1Q8WUH2 860 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 INPP5DQ92835 1189 aa20.23■□□□□ 0.83
CHRNB1-201ENST00000306071 EYA3Q99504 573 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms