RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ARL4AP40617 200 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.82
PTPRE-202ENST00000306042 NECAB2Q7Z6G3 386 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 GLYCTKQ8IVS8 523 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.82
PTPRE-202ENST00000306042 TMEM35BQ8NCS4 154 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 FBXL13Q8NEE6 735 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 ASIC3Q9UHC3 531 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 DNAJC12Q9UKB3 198 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 UQCRHLA0A096LP55 91 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 UNCXA6NJT0 531 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 EVI5O60447 810 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 UQCRHP07919 91 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 IFNL1Q8IU54 200 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 RSAD2Q8WXG1 361 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 PSMB7Q99436 277 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 OSMRQ99650 979 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 GOLPH3LQ9H4A5 285 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 STRIP2Q9ULQ0 834 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 KCNB1Q14721 858 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 GJC2Q5T442 439 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 LBX2Q6XYB7 198 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 VSIG10LQ86VR7 867 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 CDR2LQ86X02 465 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 C4orf19Q8IY42 314 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 SEPT10Q9P0V9 454 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 FEZ2Q9UHY8 353 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 MYMKA6NI61 221 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 TLR2O60603 784 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 EGFRP00533 1210 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 IFNB1P01574 187 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 CLTAP09496 248 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 TRIM49P0CI25 452 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 TRIM49CP0CI26 452 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 ZNF18P17022 549 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 ADORA2BP29275 332 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 MESDQ14696 234 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 BSPRYQ5W0U4 402 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 TOGARAM2Q6ZUX3 1019 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 CCDC105Q8IYK2 499 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 HVCN1Q96D96 273 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 GHRP10912 638 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 GBP1P32455 592 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 NAMPTP43490 491 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 RINT1Q6NUQ1 792 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 CASC4Q6P4E1 433 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 SH3BP5LQ7L8J4 393 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 C7orf25Q9BPX7 421 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 TRPM3Q9HCF6 1732 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 EMSYQ7Z589 1322 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 A0A0G2JLL6 359 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 LGALS2P05162 132 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 CRHR2Q13324 411 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 NTRK3Q16288 839 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 PKN1Q16512 942 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 NOL9Q5SY16 702 aaKnown RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 PRRT2Q7Z6L0 340 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 TMEM199Q8N511 208 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 SYT2Q8N9I0 419 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-202ENST00000306042 CYP2W1Q8TAV3 490 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 C7orf43Q8WVR3 580 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 IFT81Q8WYA0 676 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 ZKSCAN5Q9Y2L8 839 aa9.95□□□□□ -0.82
PTPRE-202ENST00000306042 A0A087WZ62 844 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 UBA1P22314 1058 aaKnown RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 NFKBIAP25963 317 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 KRT31Q15323 416 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 RNF219Q5W0B1 726 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 BTNL9Q6UXG8 535 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 GANCQ8TET4 914 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 MRFAP1L1Q96HT8 127 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 FDXACB1Q9BRP7 624 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PLCH1Q4KWH8 1693 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 M0QYV0 167 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 C2CD2LO14523 706 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 CYTH3O43739 400 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PRPSAP2O60256 369 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PLA2G6O60733 806 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 AMHP03971 560 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 GRIK1P39086 918 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PTGER2P43116 358 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 VAV2P52735 878 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 SNRNP35Q16560 246 aaKnown RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 SV2CQ496J9 727 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 ZC2HC1CQ53FD0 456 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 DCP1BQ8IZD4 617 aaKnown RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 TRIM58Q8NG06 486 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 KLK14Q9P0G3 267 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PPME1Q9Y570 386 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PCDHB12Q9Y5F1 795 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 MROH7Q68CQ1 1323 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 BUB1O43683 1085 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 ZC3H11AO75152 810 aaKnown RBP eCLIP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms