RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
DDX54-201ENST00000306014 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
DDX54-201ENST00000306014 TTC16Q8NEE8 873 aa14.22□□□□□ -0.13
DDX54-201ENST00000306014 INTUQ9ULD6 942 aa14.22□□□□□ -0.13
DDX54-201ENST00000306014 A0A0G2JND7 137 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 CLDN3O15551 220 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
DDX54-201ENST00000306014 PHF2O75151 1096 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 ECM2O94769 699 aaPredicted RBP14.21□□□□□ -0.13
DDX54-201ENST00000306014 RPA1P27694 616 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 SMARCA1P28370 1054 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 CENPUQ71F23 418 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 SCFD1Q8WVM8 642 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 CXorf56Q9H5V9 222 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 PITPNM2Q9BZ72 1349 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 GPR75-ASB3A0A0A6YYF3 556 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 KLRC4O43908 158 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 MED24O75448 989 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 ZBTB7AO95365 584 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 TMEM253P0C7T8 217 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 PPP4CP60510 307 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 RAPGEF5Q92565 580 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 ATP2A3Q93084 1043 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 FAM167BQ9BTA0 163 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 TMBIM4Q9HC24 238 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 SLC24A3Q9HC58 644 aa14.21□□□□□ -0.13
DDX54-201ENST00000306014 SPAG7O75391 227 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 HSPA9P38646 679 aaKnown RBP14.21□□□□□ -0.14
DDX54-201ENST00000306014 GPR162Q16538 588 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 ARHGAP27Q6ZUM4 889 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 TTLL6Q8N841 843 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.21□□□□□ -0.145e-9■■■■■ 55.3
DDX54-201ENST00000306014 TBC1D16Q8TBP0 767 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 PNMA5Q96PV4 448 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 LRRC37BQ96QE4 947 aa14.21□□□□□ -0.14
DDX54-201ENST00000306014 ITGA4P13612 1032 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 COMTP21964 271 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 PSMC4P43686 418 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 YWHAEP62258 255 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 KRT39Q6A163 491 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 IRF2BP1Q8IU81 584 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 SLC7A3Q8WY07 619 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 THAP2Q9H0W7 228 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 VCX3BQ9H321 246 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 OSGEPQ9NPF4 335 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 NXF1Q9UBU9 619 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 CFAP73A6NFT4 308 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 TNNC2P02585 160 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 MAP7D1Q3KQU3 841 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 HAUS6Q7Z4H7 955 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 GLIS3Q8NEA6 775 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 C9orf72Q96LT7 481 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 FAM213AQ9BRX8 229 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 GINM1Q9NU53 330 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 DCTN4Q9UJW0 460 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 DENND3A2RUS2 1198 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 RTN2O75298 545 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 MTMR1Q13613 665 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 SNF8Q96H20 258 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 DDX23Q9BUQ8 820 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 RAD17O75943 681 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 RFX1P22670 979 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 SSTR3P32745 418 aaPredicted RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 TFAMQ00059 246 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 RNASELQ05823 741 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 CEP55Q53EZ4 464 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 RASIP1Q5U651 963 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 TMEM270Q6UE05 265 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 MTRQ99707 1265 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 TRIM6Q9C030 488 aaPredicted RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 SPATS2LQ9NUQ6 558 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 FGFR1OP2Q9NVK5 253 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 TPX2Q9ULW0 747 aaKnown RBP14.2□□□□□ -0.14
DDX54-201ENST00000306014 COMMD10Q9Y6G5 202 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
DDX54-201ENST00000306014 CCT8L1PA6NM43 557 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 NDUFB10O96000 172 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 TRPM8Q7Z2W7 1104 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 SPATA21Q7Z572 469 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 ZNF354CQ86Y25 554 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 PDIK1LQ8N165 341 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 FAM81BQ96LP2 452 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 DCTN3O75935 186 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 GGPS1O95749 300 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
DDX54-201ENST00000306014 ERVK-9P63128 1117 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 IZUMO3Q5VZ72 239 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 CYB5D1Q6P9G0 228 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 ZBTB8OSQ8IWT0 167 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 SGSM3Q96HU1 749 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 CARD9Q9H257 536 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 SIK3Q9Y2K2 1263 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 OPHN1O60890 802 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 AKAP3O75969 853 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 STK10O94804 968 aaKnown RBP14.19□□□□□ -0.14
DDX54-201ENST00000306014 P4HBP07237 508 aaKnown RBP14.19□□□□□ -0.14
DDX54-201ENST00000306014 ESRRAP11474 423 aaPredicted RBP14.19□□□□□ -0.14
DDX54-201ENST00000306014 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms