RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FGD4Q96M96 766 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 USH1CQ9Y6N9 552 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 PDXKO00764 312 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 NUDT17P0C025 328 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 CYP11B2P19099 503 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 ANXA13P27216 316 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
TRIM35-201ENST00000305364 MAB21L3Q8N8X9 362 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 PKD2L1Q9P0L9 805 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 O00370 1275 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 GYG2O15488 501 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 CLDN3O15551 220 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 ATMINO43313 823 aaPredicted RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 AKAP3O75969 853 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 TTLL1O95922 423 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 AUHQ13825 339 aaKnown RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 CTTNQ14247 550 aaKnown RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 ZNF268Q14587 947 aaPredicted RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 TAB3Q8N5C8 712 aaPredicted RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 KIFAP3Q92845 792 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 REEP2Q9BRK0 252 aa13.96□□□□□ -0.18
TRIM35-201ENST00000305364 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 CORO1CQ9ULV4 474 aaPredicted RBP13.96□□□□□ -0.18
TRIM35-201ENST00000305364 PNMA6FA0A0J9YX94 578 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 DISP2A7MBM2 1401 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 TXNDC9O14530 226 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 KIAA0391O15091 583 aaKnown RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 NVLO15381 856 aaKnown RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 OPHN1O60890 802 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 C4BP0C0L5 1744 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ATP4AP20648 1035 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 RASA1P20936 1047 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 DUPD1Q68J44 220 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 FGFBP2Q9BYJ0 223 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 STK33Q9BYT3 514 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 EBF2Q9HAK2 575 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ZBTB21Q9ULJ3 1066 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 A0A0A6YYK5 440 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 MAP3K7O43318 606 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 RARAP10276 462 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 MAPK4P31152 587 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CFAP157Q5JU67 520 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 RNF217Q8TC41 542 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 MOV10L1Q9BXT6 1211 aaKnown RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 INTS2Q9H0H0 1204 aaKnown RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ERVK-5Q9HDB9 667 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CTNNAL1Q9UBT7 734 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 SLC12A4Q9UP95 1085 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CFAP69A5D8W1 941 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CDH16O75309 829 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 KAZNQ674X7 775 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 PIGWQ7Z7B1 504 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 EXOC3L1Q86VI1 746 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 LRRC57Q8N9N7 239 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CCDC127Q96BQ5 260 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 SERPINB12Q96P63 405 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ZNF317Q96PQ6 595 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 GLT8D2Q9H1C3 349 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ZNF148Q9UQR1 794 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ARHGEF35A5YM69 484 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 NPEPPSP55786 919 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CLEC10AQ8IUN9 316 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ZNF564Q8TBZ8 553 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ZNF483Q8TF39 744 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-201ENST00000305364 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 ETAA1Q9NY74 926 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 TMEM59LQ9UK28 342 aa13.95□□□□□ -0.18
TRIM35-201ENST00000305364 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 LMNAP02545 664 aaKnown RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 CEP128Q6ZU80 1094 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 C4orf33Q8N1A6 199 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 PPP1R14CQ8TAE6 165 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 ATXN2LQ8WWM7 1075 aaKnown RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 NUP85Q9BW27 656 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 SAYSD1Q9NPB0 183 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 ARHGEF26Q96DR7 871 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 SNF8Q96H20 258 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 CYTH2Q99418 400 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 ATF7P17544 494 aaPredicted RBP13.94□□□□□ -0.18
TRIM35-201ENST00000305364 NEDD1Q8NHV4 660 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 HES6Q96HZ4 224 aa13.94□□□□□ -0.18
TRIM35-201ENST00000305364 CFAP57Q96MR6 1250 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms