RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 FAM167AQ96KS9 214 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 CEP89Q96ST8 783 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 PARD6BQ9BYG5 372 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 GPR88Q9GZN0 384 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 PORCNQ9H237 461 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 NRBP2Q9NSY0 501 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 SALL4Q9UJQ4 1053 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 A0A0A6YYK5 440 aaPredicted RBP21.09■□□□□ 0.97
HOXC4-201ENST00000303406 CCDC151A5D8V7 595 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 EVI5O60447 810 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 PIGRP01833 764 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 ARL2P36404 184 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 NAMPTP43490 491 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 MXI1P50539 228 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SP4Q02446 784 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 PPP3CAQ08209 521 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SNAPC2Q13487 334 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 KIF22Q14807 665 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 TARBP2Q15633 366 aaKnown RBP21.09■□□□□ 0.97
HOXC4-201ENST00000303406 KIAA0753Q2KHM9 967 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 ALKBH5Q6P6C2 394 aaKnown RBP21.09■□□□□ 0.97
HOXC4-201ENST00000303406 GJB7Q6PEY0 223 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 MOB2Q70IA6 237 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SLC30A5Q8TAD4 765 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SEPT1Q8WYJ6 367 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SYT11Q9BT88 431 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 KIAA1586Q9HCI6 787 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 OGFRQ9NZT2 677 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 PNMA3Q9UL41 463 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 COQ4Q9Y3A0 265 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 ADGRA3Q8IWK6 1321 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 ZRANB2O95218 330 aaKnown RBP eCLIP21.09■□□□□ 0.97
HOXC4-201ENST00000303406 ADRB2P07550 413 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 KLRC1P26715 233 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 DLG4P78352 724 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 KCTD2Q14681 263 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SLC39A4Q6P5W5 647 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 GPIHBP1Q8IV16 184 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 PLEKHO2Q8TD55 490 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 HNRNPLLQ8WVV9 542 aaKnown RBP21.09■□□□□ 0.97
HOXC4-201ENST00000303406 FGD4Q96M96 766 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 MMP19Q99542 508 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 ANKZF1Q9H8Y5 726 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 FAM53CQ9NYF3 392 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 RNF14Q9UBS8 474 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SLC45A1Q9Y2W3 748 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 STYXL1Q9Y6J8 313 aa21.09■□□□□ 0.97
HOXC4-201ENST00000303406 SOCS7O14512 581 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 PEX10O60683 326 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 PHLDB3Q6NSJ2 640 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 EXOC8Q8IYI6 725 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 GPD1LQ8N335 351 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 PARD3BQ8TEW8 1205 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 ZNF526Q8TF50 670 aaPredicted RBP21.08■□□□□ 0.96
HOXC4-201ENST00000303406 PCYT2Q99447 389 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 KIFC3Q9BVG8 833 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 TMEM117Q9H0C3 514 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 TMEM8AQ9HCN3 771 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 TXNRD2Q9NNW7 524 aa21.08■□□□□ 0.96
HOXC4-201ENST00000303406 DDX3XO00571 662 aaKnown RBP eCLIP21.07■□□□□ 0.96
HOXC4-201ENST00000303406 LGR5O75473 907 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 H2AFZP0C0S5 128 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 STAT5BP51692 787 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 KRT39Q6A163 491 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 H2AFVQ71UI9 128 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 TAS1R3Q7RTX0 852 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 TRMT1LQ7Z2T5 733 aaKnown RBP21.07■□□□□ 0.96
HOXC4-201ENST00000303406 CBWD2Q8IUF1 395 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 OLIG1Q8TAK6 271 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 SLC7A3Q8WY07 619 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 OSBPL9Q96SU4 736 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 TMEM134Q9H6X4 195 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 ZNF446Q9NWS9 450 aa21.07■□□□□ 0.96
HOXC4-201ENST00000303406 GAS2O43903 313 aaKnown RBP21.06■□□□□ 0.96
HOXC4-201ENST00000303406 GGPS1O95749 300 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 GCLMP48507 274 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 SOX10P56693 466 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 CYP24A1Q07973 514 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 ENOX2Q16206 610 aaKnown RBP21.06■□□□□ 0.96
HOXC4-201ENST00000303406 CREG2Q8IUH2 290 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 ANKRD13CQ8N6S4 541 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 POMGNT1Q8WZA1 660 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 FAM81BQ96LP2 452 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 MMS19Q96T76 1030 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 TLR10Q9BXR5 811 aa21.06■□□□□ 0.96
HOXC4-201ENST00000303406 TARSL2A2RTX5 802 aaKnown RBP21.05■□□□□ 0.96
HOXC4-201ENST00000303406 CES2O00748 559 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 HNRNPDLO14979 420 aaKnown RBP21.05■□□□□ 0.96
HOXC4-201ENST00000303406 SRGAP2O75044 1071 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 MCM3P25205 808 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 GPC3P51654 580 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 ERVK-9P63128 1117 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 STRN3Q13033 797 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 Q3C1V9 767 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 CC2D1AQ6P1N0 951 aaPredicted RBP21.05■□□□□ 0.96
HOXC4-201ENST00000303406 WDR93Q6P2C0 686 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 CALR3Q96L12 384 aaKnown RBP21.05■□□□□ 0.96
HOXC4-201ENST00000303406 PACSIN1Q9BY11 444 aa21.05■□□□□ 0.96
HOXC4-201ENST00000303406 GOLGA8IPA6NC78 632 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 GOLGA8JA6NMD2 632 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms