RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ARHGAP28Q9P2N2 729 aa15.78■□□□□ 0.12
SHCBP1-201ENST00000303383 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
SHCBP1-201ENST00000303383 PCDHA13Q9Y5I0 950 aa15.78■□□□□ 0.12
SHCBP1-201ENST00000303383 GPD1LQ8N335 351 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 MACROD2A1Z1Q3 448 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 MAPK13O15264 365 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 MAFO75444 373 aaPredicted RBP15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 STAT1P42224 750 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 IGBP1P78318 339 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 GJC2Q5T442 439 aaPredicted RBP15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 IER5Q5VY09 327 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 ZBTB8OSQ8IWT0 167 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 FAM213AQ9BRX8 229 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 ERAP1Q9NZ08 941 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 TRIM10Q9UDY6 481 aa15.77■□□□□ 0.12
SHCBP1-201ENST00000303383 HBP1O60381 514 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 LGR5O75473 907 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 CCDC172P0C7W6 258 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 SRGAP2CP0DJJ0 459 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 DLATP10515 647 aaKnown RBP15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 GARTP22102 1010 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 GTF2F1P35269 517 aaKnown RBP eCLIP15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 DLG4P78352 724 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 GFPT1Q06210 699 aaPredicted RBP15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 ARHGAP44Q17R89 818 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 GJB7Q6PEY0 223 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 FMNL3Q8IVF7 1028 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 TCHPQ9BT92 498 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 ANKFY1Q9P2R3 1169 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 DNAJC12Q9UKB3 198 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 MYO6Q9UM54 1294 aa15.77■□□□□ 0.11
SHCBP1-201ENST00000303383 ARID2Q68CP9 1835 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 GAS2O43903 313 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ARL2P36404 184 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ADCYAP1R1P41586 468 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 LRRC71Q8N4P6 559 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 TSC1Q92574 1164 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 FNBP1Q96RU3 617 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 NAPGQ99747 312 aaPredicted RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 AIPL1Q9NZN9 384 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 TFR2Q9UP52 801 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF233A6NK53 670 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 HARSP12081 509 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ADSSP30520 456 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ARHGAP25P42331 645 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 TARBP2Q15633 366 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 SLFN12LQ6IEE8 588 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 IQCEQ6IPM2 695 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF467Q7Z7K2 595 aaPredicted RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ZSWIM2Q8NEG5 633 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 SECISBP2LQ93073 1101 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 APEX2Q9UBZ4 518 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF215Q9UL58 517 aaPredicted RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 GRM1Q13255 1194 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 GRB14Q14449 540 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 MXD4Q14582 209 aaPredicted RBP15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 TMEM63BQ5T3F8 832 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 RGMBQ6NW40 437 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 FBXL5Q9UKA1 691 aa15.76■□□□□ 0.11
SHCBP1-201ENST00000303383 P4HA2O15460 535 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 ABL1P00519 1130 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 ADRB2P07550 413 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 FERP16591 822 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 MAML3Q96JK9 1138 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 TINF2Q9BSI4 451 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 ADAMTS1Q9UHI8 967 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 TLR2O60603 784 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 GFPT2O94808 682 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 EFNA5P52803 228 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 CHMP4BP1P59074 171 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 RHPN2Q8IUC4 686 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 RNF149Q8NC42 400 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 ABHD16BQ9H3Z7 469 aa15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 AGO2Q9UKV8 859 aaKnown RBP15.75■□□□□ 0.11
SHCBP1-201ENST00000303383 SLC15A5A6NIM6 579 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 PPP3CAQ08209 521 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 CAPSQ13938 189 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 TFDP1Q14186 410 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 HGSNATQ68CP4 663 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 TMEM174Q8WUU8 243 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 L2HGDHQ9H9P8 463 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 SUCLA2Q9P2R7 463 aaPredicted RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 USP20Q9Y2K6 914 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 PLXNB2O15031 1838 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 TACC1O75410 805 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 USP8P40818 1118 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 ARHGAP1Q07960 439 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 DRAP1Q14919 205 aaPredicted RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 KRT39Q6A163 491 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms