RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 MRPL44Q9H9J2 332 aaKnown RBP22.06■■□□□ 1.12
SCAMP3-201ENST00000302631 CHST12Q9NRB3 414 aa22.06■■□□□ 1.12
SCAMP3-201ENST00000302631 AGPAT5Q9NUQ2 364 aa22.06■■□□□ 1.12
SCAMP3-201ENST00000302631 DENND3A2RUS2 1198 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 K7ENM7 598 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 TSPAN1O60635 241 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 SMC2O95347 1197 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 PRKCBP05771 671 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 ALCAMQ13740 583 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 TMEM240Q5SV17 173 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 CATSPER4Q7RTX7 472 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 HPS3Q969F9 1004 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 FTHL17Q9BXU8 183 aa22.05■■□□□ 1.12
SCAMP3-201ENST00000302631 CASP5P51878 434 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 NFX1Q12986 1120 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 STK4Q13043 487 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 RTN4RL1Q86UN2 441 aaPredicted RBP22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 ZNF507Q8TCN5 953 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 ERCC4Q92889 916 aaPredicted RBP22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 SMARCE1Q969G3 411 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 TRAIPQ9BWF2 469 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 NUP62CLQ9H1M0 184 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 EXOC1Q9NV70 894 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 TBC1D7Q9P0N9 293 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 KIAA1468Q9P260 1216 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 TBX20Q9UMR3 447 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 PCDHB13Q9Y5F0 798 aa22.04■■□□□ 1.12
SCAMP3-201ENST00000302631 CNTNAP2Q9UHC6 1331 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 TTLL13PA6NNM8 815 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 PIGRP01833 764 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 ACRP10323 421 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 ARF4P18085 180 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 CAMK4Q16566 473 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 ZC2HC1CQ53FD0 456 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 PSRC1Q6PGN9 363 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 RBM43Q6ZSC3 357 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 MAP4K3Q8IVH8 894 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 KIAA0895Q8NCT3 520 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 GLIS3Q8NEA6 775 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 LINC01599Q8WXQ3 324 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 CCDC47Q96A33 483 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 RMND1Q9NWS8 449 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 CEP290O15078 2479 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 TTC3P53804 2025 aa22.03■■□□□ 1.12
SCAMP3-201ENST00000302631 A0A1B0GUA9 196 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 ABHD14A-ACY1A0A1B0GW23 586 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 EIF3DO15371 548 aaKnown RBP eCLIP22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 B4GALT5O43286 388 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 MGEA5O60502 916 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 BAIAP3O94812 1187 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 ERLIN2O94905 339 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 MYBP10242 640 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 BMT2Q1RMZ1 405 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 KLHL40Q2TBA0 621 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 L1TD1Q5T7N2 865 aaKnown RBP22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 ZNF365Q70YC5 407 aa22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.02■■□□□ 1.127e-9■□□□□ 11.3
SCAMP3-201ENST00000302631 TSPYL2Q9H2G4 693 aaPredicted RBP22.02■■□□□ 1.12
SCAMP3-201ENST00000302631 GCNT3O95395 438 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 FGBP02675 491 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 BMP8BP34820 402 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 PRPF4BQ13523 1007 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 IKBKEQ14164 716 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 NFKBIBQ15653 356 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 COBLL1Q53SF7 1204 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 ZPBP2Q6X784 338 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 SCFD1Q8WVM8 642 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 HERVK_113Q902F9 699 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 CCDC51Q96ER9 411 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 ACO2Q99798 780 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 MRPL4Q9BYD3 311 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 GTPBP4Q9BZE4 634 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 PTPRHQ9HD43 1115 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 SLC39A2Q9NP94 309 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 RGS18Q9NS28 235 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 MAN1B1Q9UKM7 699 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 UBE4BO95155 1302 aa22.01■■□□□ 1.11
SCAMP3-201ENST00000302631 PTPRSQ13332 1948 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 ENPP3O14638 875 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 EFCAB14O75071 495 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 ACTN1P12814 892 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 PROZP22891 400 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 HOXD13P35453 343 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 FAM189BP81408 668 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 STRN3Q13033 797 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 RASIP1Q5U651 963 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 STXBP4Q6ZWJ1 553 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 TNFSF13BQ9Y275 285 aa22■■□□□ 1.11
SCAMP3-201ENST00000302631 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 ABLIM1O14639 778 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 PRPF6O94906 941 aaKnown RBP21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 NCBP1Q09161 790 aaKnown RBP21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 KCNA1Q09470 495 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 MORC3Q14149 939 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 UBXN11Q5T124 520 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 ZNF658Q5TYW1 1059 aaPredicted RBP21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 NOTUMQ6P988 496 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 CRIPAKQ8N1N5 446 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 TRIML1Q8N9V2 468 aa21.99■■□□□ 1.11
SCAMP3-201ENST00000302631 CPB2Q96IY4 423 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms