RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 NT5C3AQ9H0P0 336 aa7.31□□□□□ -1.24
ITGB1-201ENST00000302278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.31□□□□□ -1.24
ITGB1-201ENST00000302278 MRPL17Q9NRX2 175 aaKnown RBP7.31□□□□□ -1.24
ITGB1-201ENST00000302278 NRBP2Q9NSY0 501 aa7.31□□□□□ -1.24
ITGB1-201ENST00000302278 DNAJB4Q9UDY4 337 aa7.31□□□□□ -1.24
ITGB1-201ENST00000302278 FBXL21Q9UKT6 434 aa7.31□□□□□ -1.24
ITGB1-201ENST00000302278 CYP3A7-CYP3A51PA0A087WV96 503 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 POTEMA6NI47 508 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 SHISA7A6NL88 538 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 BACH1O14867 736 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 KINO60870 393 aaKnown RBP7.3□□□□□ -1.24
ITGB1-201ENST00000302278 CYP3A7P24462 503 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 PRKCEQ02156 737 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 FZD5Q13467 585 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 DCLRE1AQ6PJP8 1040 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 APOA5Q6Q788 366 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 HEATR3Q7Z4Q2 680 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 EXOC6Q8TAG9 804 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 IFT122Q9HBG6 1241 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 ZSCAN32Q9NX65 697 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 GABBR1Q9UBS5 961 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 RBM8AQ9Y5S9 174 aaKnown RBP7.3□□□□□ -1.24
ITGB1-201ENST00000302278 R4GN57 208 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 TICRRQ7Z2Z1 1910 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 PAPSS2O95340 614 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-201ENST00000302278 MLLT6P55198 1093 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-201ENST00000302278 SHC2P98077 582 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 POU5F1BQ06416 359 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 MOXD1Q6UVY6 613 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 AUTS2Q8WXX7 1259 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 AKT3Q9Y243 479 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 GVINP1Q7Z2Y8 2422 aa7.3□□□□□ -1.24
ITGB1-201ENST00000302278 KANSL1LA0AUZ9 987 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 SMCO2A6NFE2 343 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 PSMD10O75832 226 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 HNRNPA1P09651 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 NAPAP54920 295 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 UGCGQ16739 394 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 VARS2Q5ST30 1063 aaKnown RBP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 SRGAP1Q7Z6B7 1085 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 ZNF280BQ86YH2 543 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 URGCPQ8TCY9 931 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 FAM186AA6NE01 2351 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 CCDC195A0A1B0GUA6 201 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 NT5C1B-RDH14C9J2C7 533 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 NRP1O14786 923 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 TEX28O15482 410 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 ZC3H11AO75152 810 aaKnown RBP eCLIP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 CFHP08603 1231 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 KLRC2P26717 231 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 AXLP30530 894 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 USP11P51784 963 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 LIMK1P53667 647 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 MTSS1LQ765P7 747 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 EXOC8Q8IYI6 725 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 TRPV5Q9NQA5 729 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 FBXW11Q9UKB1 542 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 KCNH3Q9ULD8 1083 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 SLC27A2O14975 620 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 GAS2O43903 313 aaKnown RBP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 ZMYND10O75800 440 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 GLUD1P00367 558 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 HOXA11P31270 313 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 GLUD2P49448 558 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 XKR3Q5GH77 459 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 RSAD2Q8WXG1 361 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 JPH2Q9BR39 696 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-201ENST00000302278 NFKBIZQ9BYH8 718 aa7.29□□□□□ -1.24
ITGB1-201ENST00000302278 M0R2N6 131 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 SLC30A4O14863 429 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 FOXD2O60548 495 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 MICAL2O94851 1124 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 MLF2Q15773 248 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 DIEXFQ68CQ4 756 aaKnown RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 CMTR1Q8N1G2 835 aaKnown RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 LRRC71Q8N4P6 559 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 METTL13Q8N6R0 699 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 SMG8Q8ND04 991 aaKnown RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 PIBF1Q8WXW3 757 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 RSAD1Q9HA92 442 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 DISC1Q9NRI5 854 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 PCDHB2Q9Y5E7 798 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 OTOGLQ3ZCN5 2332 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 MEIS3P2A8K0S8 358 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 MSH4O15457 936 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 URODP06132 367 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 DRP2Q13474 957 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 NETO1Q8TDF5 533 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 DNASE1L2Q92874 299 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 KCNB2Q92953 911 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 NELL2Q99435 816 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 CA14Q9ULX7 337 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 GINS2Q9Y248 185 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 NUMBLQ9Y6R0 609 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 ECI2O75521 394 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 ALDH2P05091 517 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 PFKPQ01813 784 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms