RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FBXL18Q96ME1 805 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 NUCKS1Q9H1E3 243 aaKnown RBP16.95■□□□□ 0.3
LSM6-201ENST00000296581 TMEM134Q9H6X4 195 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 MGAMO43451 1857 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 LRRIQ4A6NIV6 560 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 TUBB4AP04350 444 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 SLC9A1P19634 815 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 ZNF484Q5JVG2 852 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 RDH13Q8NBN7 331 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 ZSWIM2Q8NEG5 633 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 PRPF31Q8WWY3 499 aaKnown RBP16.94■□□□□ 0.3
LSM6-201ENST00000296581 SYN2Q92777 582 aaPredicted RBP16.94■□□□□ 0.3
LSM6-201ENST00000296581 ZIC5Q96T25 663 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 C16orf70Q9BSU1 422 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 RNPEPQ9H4A4 650 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 FLRT1Q9NZU1 646 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 FBXL5Q9UKA1 691 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 GJD2Q9UKL4 321 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 EPN1Q9Y6I3 576 aaPredicted RBP16.94■□□□□ 0.3
LSM6-201ENST00000296581 STYXL1Q9Y6J8 313 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 HNRNPDLO14979 420 aaKnown RBP16.94■□□□□ 0.3
LSM6-201ENST00000296581 CA12O43570 354 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 ADCY3O60266 1144 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 IGHA2P01877 340 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 TRIM49P0CI25 452 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 TRIM49CP0CI26 452 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 CAPN2P17655 700 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 VAMP7P51809 220 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 POLR2FP61218 127 aaKnown RBP16.94■□□□□ 0.3
LSM6-201ENST00000296581 STRN3Q13033 797 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 OLFML2BQ68BL8 750 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 SOCS4Q8WXH5 440 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 SIX2Q9NPC8 291 aa16.94■□□□□ 0.3
LSM6-201ENST00000296581 PHLPP2Q6ZVD8 1323 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 ADCY6O43306 1168 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 NDUFA10O95299 355 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 RGS2P41220 211 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 APBA1Q02410 837 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 MXD4Q14582 209 aaPredicted RBP16.93■□□□□ 0.3
LSM6-201ENST00000296581 KLHDC7AQ5VTJ3 777 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 PSPC1Q8WXF1 523 aaKnown RBP16.93■□□□□ 0.3
LSM6-201ENST00000296581 NLRC4Q9NPP4 1024 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 COL1A2P08123 1366 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 K7ERI5 159 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 ADRB2P07550 413 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 MMP3P08254 477 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 ACTN1P12814 892 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 ENPEPQ07075 957 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 SNRNP35Q16560 246 aaKnown RBP16.93■□□□□ 0.3
LSM6-201ENST00000296581 CBWD6Q4V339 395 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 CBWD3Q5JTY5 395 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 CBWD5Q5RIA9 395 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 C1orf220Q5T0J3 134 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 CDCA2Q69YH5 1023 aaPredicted RBP16.93■□□□□ 0.3
LSM6-201ENST00000296581 OR6J1Q8NGC5 347 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 PLEKHO2Q8TD55 490 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 TRAPPC12Q8WVT3 735 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 POMGNT1Q8WZA1 660 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 APBA2Q99767 749 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 NHEJ1Q9H9Q4 299 aaPredicted RBP16.93■□□□□ 0.3
LSM6-201ENST00000296581 SUGCTQ9HAC7 445 aa16.93■□□□□ 0.3
LSM6-201ENST00000296581 ECM2O94769 699 aaPredicted RBP16.92■□□□□ 0.3
LSM6-201ENST00000296581 C22orf31O95567 290 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 ZNF865P0CJ78 1059 aaPredicted RBP16.92■□□□□ 0.3
LSM6-201ENST00000296581 LIG4P49917 911 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 DLG4P78352 724 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 LAMTOR4Q0VGL1 99 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 ACRBPQ8NEB7 543 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 SAAL1Q96ER3 474 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 BICD1Q96G01 975 aa16.92■□□□□ 0.3
LSM6-201ENST00000296581 GNEQ9Y223 722 aaKnown RBP16.92■□□□□ 0.3
LSM6-201ENST00000296581 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 TNPO2O14787 897 aaKnown RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 KIAA0391O15091 583 aaKnown RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 PMM2O15305 246 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 P4HA2O15460 535 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 INSRRP14616 1297 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 UCHL3P15374 230 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 EFNA5P52803 228 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 MYL7Q01449 175 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 GPD1LQ8N335 351 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 LRRC71Q8N4P6 559 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 MFSD14AQ96MC6 490 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 CCDC113Q9H0I3 377 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 ARHGAP20Q9P2F6 1191 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 ZNF215Q9UL58 517 aaPredicted RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 MYO6Q9UM54 1294 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 EVPLQ92817 2033 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 ZNF286BP0CG31 522 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 CYLC1P35663 651 aaPredicted RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 CCL14Q16627 93 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms