RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SUGT1Q9Y2Z0 365 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 NR3C1P04150 777 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 PDHBP11177 359 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 SPAG7O75391 227 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
HPS3-201ENST00000296051 MTM1Q13496 603 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 CAPRIN2Q6IMN6 1127 aaKnown RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 RYBPQ8N488 228 aaPredicted RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 PARK7Q99497 189 aaKnown RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 SGK1O00141 431 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 XPAP23025 273 aaPredicted RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 IRX4P78413 519 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 CYB5D1Q6P9G0 228 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 NEDD1Q8NHV4 660 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 MTMR8Q96EF0 704 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 SH2D3AQ9BRG2 576 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 LRRC4Q9HBW1 653 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 TYW5A2RUC4 315 aaKnown RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 WDR64B1ANS9 1081 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 GOLGA8SH3BPF8 625 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 GOLGA8MH3BSY2 632 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 ARHGAP4P98171 946 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 TMED8Q6PL24 325 aaPredicted RBP14.36□□□□□ -0.11
HPS3-201ENST00000296051 GRK7Q8WTQ7 553 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 ANKS1AQ92625 1134 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 RAB20Q9NX57 234 aa14.36□□□□□ -0.11
HPS3-201ENST00000296051 LMTK2Q8IWU2 1503 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 LONRF1Q17RB8 773 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 ZC3H18Q86VM9 953 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 FAM151AQ8WW52 585 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 MAIP1Q8WWC4 291 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 P3H4Q92791 437 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 TSC22D3Q99576 134 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 VCX3BQ9H321 246 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 RPF1Q9H9Y2 349 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 SYF2O95926 243 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 FTLP02792 175 aaPredicted RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 EPHX2P34913 555 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 GALCP54803 685 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 ITIH3Q06033 890 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 CCDC137Q6PK04 289 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 SCARA5Q6ZMJ2 495 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 XPO6Q96QU8 1125 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 ALG13Q9NP73 1137 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 MYBL1P10243 752 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 MAPK6Q16659 721 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 GJB7Q6PEY0 223 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 TGS1Q96RS0 853 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 STAM2O75886 525 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 GAP43P17677 238 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 MAN1A1P33908 653 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 ECE1P42892 770 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 TTI2Q6NXR4 508 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 USP38Q8NB14 1042 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 SGSM3Q96HU1 749 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
HPS3-201ENST00000296051 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
HPS3-201ENST00000296051 CNTNAP5Q8WYK1 1306 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 SCP2P22307 547 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 MXI1P50539 228 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 RAD23BP54727 409 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 AP3B2Q13367 1082 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 RHPN2Q8IUC4 686 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 ADGRF4Q8IZF3 695 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 PSPC1Q8WXF1 523 aaKnown RBP14.34□□□□□ -0.11
HPS3-201ENST00000296051 ZKSCAN4Q969J2 545 aaPredicted RBP14.34□□□□□ -0.11
HPS3-201ENST00000296051 FAM118BQ9BPY3 351 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 MSTO1Q9BUK6 570 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 GRID2IPA4D2P6 1211 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 ASB14A6NK59 587 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 CTSHP09668 335 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 SERPINB6P35237 376 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 RCAN1P53805 252 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 BBS9Q3SYG4 887 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 C12orf60Q5U649 245 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 INTS5Q6P9B9 1019 aaKnown RBP14.34□□□□□ -0.11
HPS3-201ENST00000296051 TMEM139Q8IV31 216 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 TXLNGQ9NUQ3 528 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 RCCD1A6NED2 376 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 NDUFB10O96000 172 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 HADHQ16836 314 aaKnown RBP14.34□□□□□ -0.11
HPS3-201ENST00000296051 PROM2Q8N271 834 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 MIS12Q9H081 205 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 PNPLA7Q6ZV29 1317 aa14.34□□□□□ -0.11
HPS3-201ENST00000296051 UPP2O95045 317 aa14.33□□□□□ -0.11
HPS3-201ENST00000296051 SLC29A2Q14542 456 aa14.33□□□□□ -0.11
HPS3-201ENST00000296051 SPATA24Q86W54 205 aa14.33□□□□□ -0.11
HPS3-201ENST00000296051 SAYSD1Q9NPB0 183 aa14.33□□□□□ -0.11
HPS3-201ENST00000296051 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.11
HPS3-201ENST00000296051 ANAPC7Q9UJX3 599 aa14.33□□□□□ -0.11
HPS3-201ENST00000296051 MAD1L1Q9Y6D9 718 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms