RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GNEQ9Y223 722 aaKnown RBP24.92■■□□□ 1.58
PTX3-201ENST00000295927 H3BRB1 525 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 DYNC1LI2O43237 492 aaPredicted RBP24.92■■□□□ 1.58
PTX3-201ENST00000295927 ADRB2P07550 413 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 GARTP22102 1010 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 LIG4P49917 911 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 VAMP7P51809 220 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 POLR2FP61218 127 aaKnown RBP24.92■■□□□ 1.58
PTX3-201ENST00000295927 IGBP1P78318 339 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 EFCAB12Q6NXP0 572 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 NYAP1Q6ZVC0 841 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 ZBTB10Q96DT7 871 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 TUT1Q9H6E5 874 aaKnown RBP24.92■■□□□ 1.58
PTX3-201ENST00000295927 NLRC4Q9NPP4 1024 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 PLCB1Q9NQ66 1216 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 PLAGL2Q9UPG8 496 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 USP20Q9Y2K6 914 aa24.92■■□□□ 1.58
PTX3-201ENST00000295927 C22orf31O95567 290 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 ACTN1P12814 892 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 HNRNPH3P31942 346 aaKnown RBP24.91■■□□□ 1.58
PTX3-201ENST00000295927 DLG4P78352 724 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 SNRNP35Q16560 246 aaKnown RBP24.91■■□□□ 1.58
PTX3-201ENST00000295927 CBWD2Q8IUF1 395 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 GCNT4Q9P109 453 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 ADGRG1Q9Y653 693 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 PHLPP2Q6ZVD8 1323 aa24.91■■□□□ 1.58
PTX3-201ENST00000295927 LRRC53A6NM62 1247 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 PIGRP01833 764 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 SRGAP2CP0DJJ0 459 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 PTPN14Q15678 1187 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 CBWD6Q4V339 395 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 CBWD3Q5JTY5 395 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 CBWD5Q5RIA9 395 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 PDXDC1Q6P996 788 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 METTL13Q8N6R0 699 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 FBXL18Q96ME1 805 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 ARHGAP39Q9C0H5 1083 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 COL1A2P08123 1366 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 TNNT1P13805 278 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 CLCN3P51790 818 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 FCGRTP55899 365 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 DEFB115Q30KQ5 88 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 RHPN2Q8IUC4 686 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 PLEKHO2Q8TD55 490 aa24.9■■□□□ 1.58
PTX3-201ENST00000295927 A6NJR5 290 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 EDN1P05305 212 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 CCDC175P0C221 793 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 KLRC1P26715 233 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 PSMC4P43686 418 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 EFNA5P52803 228 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 CDK17Q00537 523 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 KLHDC7AQ5VTJ3 777 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 CDCA2Q69YH5 1023 aaPredicted RBP24.89■■□□□ 1.58
PTX3-201ENST00000295927 RNF149Q8NC42 400 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 LENG1Q96BZ8 264 aaPredicted RBP24.89■■□□□ 1.58
PTX3-201ENST00000295927 CAPNS2Q96L46 248 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 STYXL1Q9Y6J8 313 aa24.89■■□□□ 1.58
PTX3-201ENST00000295927 KAT6AQ92794 2004 aa24.89■■□□□ 1.57
PTX3-201ENST00000295927 MCCD1P59942 119 aaPredicted RBP24.88■■□□□ 1.57
PTX3-201ENST00000295927 LACTBP83111 547 aaPredicted RBP24.88■■□□□ 1.57
PTX3-201ENST00000295927 C1orf220Q5T0J3 134 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 TLK2Q86UE8 772 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 GPD1LQ8N335 351 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 TARS2Q9BW92 718 aaKnown RBP24.88■■□□□ 1.57
PTX3-201ENST00000295927 SIX2Q9NPC8 291 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 EPN1Q9Y6I3 576 aaPredicted RBP24.88■■□□□ 1.57
PTX3-201ENST00000295927 MAGEB2O15479 319 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 GJB1P08034 283 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 MYL7Q01449 175 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 CCDC113Q9H0I3 377 aa24.88■■□□□ 1.57
PTX3-201ENST00000295927 NUCKS1Q9H1E3 243 aaKnown RBP24.88■■□□□ 1.57
PTX3-201ENST00000295927 UCHL3P15374 230 aa24.87■■□□□ 1.57
PTX3-201ENST00000295927 PPP3CAQ08209 521 aa24.87■■□□□ 1.57
PTX3-201ENST00000295927 ZBTB8OSQ8IWT0 167 aa24.87■■□□□ 1.57
PTX3-201ENST00000295927 ACRBPQ8NEB7 543 aa24.87■■□□□ 1.57
PTX3-201ENST00000295927 MFSD14AQ96MC6 490 aa24.87■■□□□ 1.57
PTX3-201ENST00000295927 NHEJ1Q9H9Q4 299 aaPredicted RBP24.87■■□□□ 1.57
PTX3-201ENST00000295927 ASAP2O43150 1006 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 NDUFA10O95299 355 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 TFDP1Q14186 410 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 TRIM65Q6PJ69 517 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 LINC01465Q8N7H1 131 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 ZBTB45Q96K62 511 aaPredicted RBP24.86■■□□□ 1.57
PTX3-201ENST00000295927 NLRP4Q96MN2 994 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 FAM213AQ9BRX8 229 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 HAPLN2Q9GZV7 340 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 C2orf40Q9H1Z8 148 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 GABRQQ9UN88 632 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 PPFIA1Q13136 1202 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 SLFN12LQ6IEE8 588 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 PARD3BQ8TEW8 1205 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 SYN2Q92777 582 aaPredicted RBP24.86■■□□□ 1.57
PTX3-201ENST00000295927 FHOD1Q9Y613 1164 aa24.86■■□□□ 1.57
PTX3-201ENST00000295927 GOLGA6L9A6NEM1 432 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 EXTL3O43909 919 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 MSCO60682 206 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 GCLMP48507 274 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 IRX5P78411 483 aaPredicted RBP24.85■■□□□ 1.57
PTX3-201ENST00000295927 CYP24A1Q07973 514 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 GRIK4Q16099 956 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms