RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 COL5A2P05997 1499 aaPredicted RBP11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L15C9J2P7 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L11C9JVI0 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L18D6R9N7 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L22D6RA61 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L19D6RCP7 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L20D6RJB6 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 SPAG7O75391 227 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 DLATP10515 647 aaKnown RBP11.02□□□□□ -0.64
LMX1A-201ENST00000294816 TUBP50607 506 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.64
LMX1A-201ENST00000294816 PPATQ06203 517 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L24Q0WX57 530 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 MPP2Q14168 576 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 GRIK5Q16478 980 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 SMIM5Q71RC9 77 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 CPNE8Q86YQ8 564 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 PWWP2AQ96N64 755 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 LRP5O75197 1615 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 A0A1B0GUL6 1792 aa11.02□□□□□ -0.64
LMX1A-201ENST00000294816 O00370 1275 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 UNC5CO95185 931 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 ECEL1O95672 775 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 FTLP02792 175 aaPredicted RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 PECAM1P16284 738 aaPredicted RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 COMTP21964 271 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 PAPOLAP51003 745 aaKnown RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 JAM2P57087 298 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 MGAT5Q09328 741 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 DPY19L2P1Q6NXN4 242 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 FOXR2Q6PJQ5 311 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 PIGOQ8TEQ8 1089 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 SLC20A1Q8WUM9 679 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 GPR101Q96P66 508 aaPredicted RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 RNPEPL1Q9HAU8 725 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 PIDD1Q9HB75 910 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 DLGAP2Q9P1A6 1054 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 DNM3Q9UQ16 869 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 GJB6O95452 261 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 PYGMP11217 842 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 CHKAP35790 457 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
LMX1A-201ENST00000294816 DNAJC3Q13217 504 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 TMED2Q15363 201 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 GRIPAP1Q4V328 841 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 CNBD1Q8NA66 436 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 TTC8Q8TAM2 541 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 ANKIB1Q9P2G1 1089 aa11.02□□□□□ -0.65
LMX1A-201ENST00000294816 ESYT2A0FGR8 921 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 CALB2P22676 271 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 EPHB2P29323 1055 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 DRG2P55039 364 aaKnown RBP11.01□□□□□ -0.65
LMX1A-201ENST00000294816 GIT2Q14161 759 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 RRP1BQ14684 758 aaKnown RBP11.01□□□□□ -0.65
LMX1A-201ENST00000294816 PRR16Q569H4 304 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 NSMFQ6X4W1 530 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ZDHHC14Q8IZN3 488 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 UTP4Q969X6 686 aaKnown RBP11.01□□□□□ -0.65
LMX1A-201ENST00000294816 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 PSTPIP2Q9H939 334 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 DLEC1Q9Y238 1755 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 NCANO14594 1321 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ANKRD62A6NC57 917 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 A6NHS1 94 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ANXA13P27216 316 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 KRT17Q04695 432 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 RNF207Q6ZRF8 634 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 CAPN12Q6ZSI9 719 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ASRGL1Q7L266 308 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 TEX9Q8N6V9 391 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 NEDD1Q8NHV4 660 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 CRAMP1Q96RY5 1269 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ZSWIM1Q9BR11 485 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 STK33Q9BYT3 514 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ROPN1BQ9BZX4 212 aaPredicted RBP11.01□□□□□ -0.65
LMX1A-201ENST00000294816 BHMT2Q9H2M3 363 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ROPN1Q9HAT0 212 aaPredicted RBP11.01□□□□□ -0.65
LMX1A-201ENST00000294816 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
LMX1A-201ENST00000294816 IRAK4Q9NWZ3 460 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
LMX1A-201ENST00000294816 KLHL33A6NCF5 533 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 PDXKO00764 312 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 LIN7AO14910 233 aaPredicted RBP11□□□□□ -0.65
LMX1A-201ENST00000294816 TOM1O60784 492 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 ENTPD5O75356 428 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 HSPA6P17066 643 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 HOXD13P35453 343 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 RFC5P40937 340 aa11□□□□□ -0.65
LMX1A-201ENST00000294816 STRN3Q13033 797 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms