RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PCNTO95613 3336 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 TRIM66O15016 1216 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 TTI1O43156 1089 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 FTLP02792 175 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 TNFAIP1Q13829 316 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 SYCE1Q8N0S2 351 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 AGPAT1Q99943 283 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 TBC1D22BQ9NU19 505 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 GABBR1Q9UBS5 961 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 DENND3A2RUS2 1198 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 WDR64B1ANS9 1081 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 OPA1O60313 960 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 PSMC5P62195 406 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 NLRX1Q86UT6 975 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 C10orf67Q8IYJ2 551 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 OR2W6PQ8NHA6 318 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 WRNIP1Q96S55 665 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 TMEM117Q9H0C3 514 aa17.1■□□□□ 0.33
NCKIPSD-201ENST00000294129 VWA5AO00534 786 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 CYP26A1O43174 497 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 SGPL1O95470 568 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 DAPK3O43293 454 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 ANO5Q75V66 913 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 SLC9A9Q8IVB4 645 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 ACTRT1Q8TDG2 376 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 SCFD2Q8WU76 684 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 RUBCNQ92622 972 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 TRIM51Q9BSJ1 452 aa17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
NCKIPSD-201ENST00000294129 PEX10O60683 326 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 TMEM253P0C7T8 217 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 NPTX2P47972 431 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 BSNDQ8WZ55 320 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 BTBD6Q96KE9 485 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 KMT5AQ9NQR1 393 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.33
NCKIPSD-201ENST00000294129 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 DMP1Q13316 513 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 NNTQ13423 1086 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 MESDQ14696 234 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 DCAF12L1Q5VU92 463 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 LMBRD2Q68DH5 695 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 SLC47A2Q86VL8 602 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 BICD1Q96G01 975 aa17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
NCKIPSD-201ENST00000294129 A0A0A6YYK5 440 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 MYO1CO00159 1063 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 NR3C2P08235 984 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 ANXA13P27216 316 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 TNFRSF8P28908 595 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 ADSSP30520 456 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 MARCKSL1P49006 195 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 GNGT1P63211 74 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 CPNE8Q86YQ8 564 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 POMGNT1Q8WZA1 660 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 DHX38Q92620 1227 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 SEMA4DQ92854 862 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 HES6Q96HZ4 224 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 CNGA1P29973 690 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 FLT3P36888 993 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 SMTNP53814 917 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 CEP85LQ5SZL2 805 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 ALS2CLQ60I27 953 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 NIPA1Q7RTP0 329 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 PHLDB2Q86SQ0 1253 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 SYT11Q9BT88 431 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 INTUQ9ULD6 942 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 TBX20Q9UMR3 447 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 PLAAQ9Y263 795 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 GOLGA8KD6RF30 607 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 NFKBIEO00221 500 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 ZEB2O60315 1214 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 GTF2BQ00403 316 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 C4orf19Q8IY42 314 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 UBLCP1Q8WVY7 318 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 ALG3Q92685 438 aa17.07■□□□□ 0.32
NCKIPSD-201ENST00000294129 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms