RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SYNGAP1Q96PV0 1343 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 CRKP46108 304 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 MARCKSL1P49006 195 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 MAPK7Q13164 816 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 PLCB4Q15147 1175 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 EAPPQ56P03 285 aaPredicted RBP14.39□□□□□ -0.11
SCAF4-201ENST00000286835 RNF207Q6ZRF8 634 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 PODNQ7Z5L7 613 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 SLC35C1Q96A29 364 aa14.39□□□□□ -0.11
SCAF4-201ENST00000286835 RBAK-RBAKDNI3L0D1 243 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 SPAG7O75391 227 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 ATP6V1G2O95670 118 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 TAF11Q15544 211 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 SP8Q8IXZ3 490 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 TGS1Q96RS0 853 aaKnown RBP14.38□□□□□ -0.11
SCAF4-201ENST00000286835 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 PIM2Q9P1W9 311 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 ANP32DO95626 131 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 DRD4P21917 467 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 GPC5P78333 572 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 ACCSLQ4AC99 568 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 RHOT2Q8IXI1 618 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 C9orf72Q96LT7 481 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 DUOX1Q9NRD9 1551 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 ANAPC5Q9UJX4 755 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 PODXLO00592 558 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 CHRNA3P32297 505 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 TRAF1Q13077 416 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 C2CD6Q53TS8 623 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 AGPAT1Q99943 283 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 PITPNM3Q9BZ71 974 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 YIPF3Q9GZM5 350 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 KCTD10Q9H3F6 313 aa14.38□□□□□ -0.11
SCAF4-201ENST00000286835 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
SCAF4-201ENST00000286835 ATF7P17544 494 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ERFP50548 548 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 PPP4CP60510 307 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ATG4AQ8WYN0 398 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 POP1Q99575 1024 aaKnown RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 PDHA1P08559 390 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ALDH3A1P30838 453 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 MAPK4P31152 587 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 RPL21P46778 160 aaKnown RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ELF3P78545 371 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 MTM1Q13496 603 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 DHX34Q14147 1143 aaKnown RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 PREPLQ4J6C6 727 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ZCWPW2Q504Y3 356 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 EPC2Q52LR7 807 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 HHATQ5VTY9 493 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 LNX1Q8TBB1 728 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 DDX23Q9BUQ8 820 aaKnown RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 SLC12A6Q9UHW9 1150 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 TTC7AQ9ULT0 858 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 USP15Q9Y4E8 981 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 CYP26A1O43174 497 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 TMEM253P0C7T8 217 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 KCNJ2P63252 427 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 EPHA7Q15375 998 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ARSHQ5FYA8 562 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 APEX2Q9UBZ4 518 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ENO4A6NNW6 628 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 SORBS3O60504 671 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 PHF2O75151 1096 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 AGTP01019 485 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 HARSP12081 509 aaKnown RBP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 PTENP60484 403 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 KRT17Q04695 432 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 CARD9Q9H257 536 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 TRPC6Q9Y210 931 aa14.37□□□□□ -0.11
SCAF4-201ENST00000286835 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCAF4-201ENST00000286835 TJP1Q07157 1748 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 POTEJP0CG39 1038 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 MYBL1P10243 752 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 MXI1P50539 228 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 RWDD2BP57060 319 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 SLC15A2Q16348 729 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 ALG3Q92685 438 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 LRRC4CQ9HCJ2 640 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 CTNNAL1Q9UBT7 734 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 GAP43P17677 238 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 TNFAIP1Q13829 316 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 ERMARDQ5T6L9 678 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 SLC17A8Q8NDX2 589 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 CRAMP1Q96RY5 1269 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
SCAF4-201ENST00000286835 PI4KBQ9UBF8 816 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 IGSF9BQ9UPX0 1349 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 CASZ1Q86V15 1759 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 RASA4BC9J798 803 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 RASA4O43374 803 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms