RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 RIPK3Q9Y572 518 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 PCDHA10Q9Y5I2 948 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 DOCK5Q9H7D0 1870 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 IGSF9BQ9UPX0 1349 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 SSC5DA1L4H1 1573 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 ZNFX1Q9P2E3 1918 aaKnown RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 TMEM150BA6NC51 233 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 C19orf81C9J6K1 198 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 SLC16A4O15374 487 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 RAD51CO43502 376 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 BUB1BO60566 1050 aaPredicted RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 DKC1O60832 514 aaKnown RBP eCLIP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 RGS20O76081 388 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 ADRB2P07550 413 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 NR3C2P08235 984 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 ACTN2P35609 894 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 NPTX2P47972 431 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 CARSP49589 748 aaKnown RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 SMTNP53814 917 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 MRPS25P82663 173 aaKnown RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 DMP1Q13316 513 aaPredicted RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 PLS1Q14651 629 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 XKR9Q5GH70 373 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 SAMD7Q7Z3H4 446 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 APOBEC3FQ8IUX4 373 aaKnown RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 RHOT2Q8IXI1 618 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 FAM71AQ8IYT1 594 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 AFAP1L1Q8TED9 768 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 CASKIN2Q8WXE0 1202 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 TMEM117Q9H0C3 514 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 UBE2TQ9NPD8 197 aaPredicted RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 GPRC5CQ9NQ84 441 aa7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 CNOT7Q9UIV1 285 aaKnown RBP7.85□□□□□ -1.15
SPARCL1-201ENST00000282470 MYPNQ86TC9 1320 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 GOLGA8KD6RF30 607 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 DDX3YO15523 660 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 SHOX2O60902 331 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 PHACTR2O75167 634 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 MTA2O94776 668 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 GTF2H1P32780 548 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ABCD1P33897 745 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 GCLMP48507 274 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 MXI1P50539 228 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 DNA2P51530 1060 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 GUCY2DQ02846 1103 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 CUL1Q13616 776 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 SNRNP35Q16560 246 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 TBC1D10BQ4KMP7 808 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 PLA2G4FQ68DD2 849 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 C11orf63Q6NUN7 778 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 NSMFQ6X4W1 530 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 OTUD6AQ7L8S5 288 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 PALB2Q86YC2 1186 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 RDH13Q8NBN7 331 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 TMC2Q8TDI7 906 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 NSUN6Q8TEA1 469 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 SEC14L1Q92503 715 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ATP6V0A1Q93050 837 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 CDHR1Q96JP9 859 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 CARD9Q9H257 536 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 TAF1DQ9H5J8 278 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 SLITRK6Q9H5Y7 841 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 OSGEPQ9NPF4 335 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 NOCTQ9UK39 431 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 AMFRQ9UKV5 643 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 NFU1Q9UMS0 254 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 PTPRFP10586 1907 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ZSCAN5CA6NGD5 496 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ZNF862O60290 1169 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 CEP104O60308 925 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 OPA1O60313 960 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 TNFAIP3P21580 790 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ECHS1P30084 290 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 GPC3P51654 580 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 CLUL1Q15846 466 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ARHGAP44Q17R89 818 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 NOL9Q5SY16 702 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 FAM102BQ5T8I3 360 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 SNRNP48Q6IEG0 339 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 CD302Q8IX05 232 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 IQCKQ8N0W5 287 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 C1orf131Q8NDD1 294 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ZSWIM2Q8NEG5 633 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 EPS8L1Q8TE68 723 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 RIN2Q8WYP3 895 aaPredicted RBP7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 ARHGEF26Q96DR7 871 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 MFSD14AQ96MC6 490 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 THAP2Q9H0W7 228 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 PICK1Q9NRD5 415 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 PPP2R3BQ9Y5P8 575 aa7.84□□□□□ -1.15
SPARCL1-201ENST00000282470 LRRC37A2A6NM11 1700 aa7.84□□□□□ -1.16
SPARCL1-201ENST00000282470 ANKRD63C9JTQ0 380 aa7.83□□□□□ -1.16
SPARCL1-201ENST00000282470 LRRN2O75325 713 aa7.83□□□□□ -1.16
SPARCL1-201ENST00000282470 GZMAP12544 262 aa7.83□□□□□ -1.16
SPARCL1-201ENST00000282470 SCP2P22307 547 aa7.83□□□□□ -1.16
SPARCL1-201ENST00000282470 CNGA1P29973 690 aa7.83□□□□□ -1.16
SPARCL1-201ENST00000282470 HNRNPH2P55795 449 aaKnown RBP7.83□□□□□ -1.16
SPARCL1-201ENST00000282470 PPFIA1Q13136 1202 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms