RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 STRN3Q13033 797 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 LPIN1Q14693 890 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 GPNMBQ14956 572 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 FAM228AQ86W67 206 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 TRIM43Q96BQ3 446 aaPredicted RBP18.9■□□□□ 0.62
SKP2-201ENST00000274254 PRIMPOLQ96LW4 560 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 ACCSQ96QU6 501 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 PPP1R12CQ9BZL4 782 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 KCTD10Q9H3F6 313 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 TMEM206Q9H813 350 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 AGO3Q9H9G7 860 aaKnown RBP18.9■□□□□ 0.62
SKP2-201ENST00000274254 NOC2LQ9Y3T9 749 aaKnown RBP18.9■□□□□ 0.62
SKP2-201ENST00000274254 ZMYM2Q9UBW7 1377 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 KIF20AO95235 890 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 PIGRP01833 764 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 SFPQP23246 707 aaKnown RBP eCLIP18.9■□□□□ 0.62
SKP2-201ENST00000274254 CYP2C18P33260 490 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 KNOP1Q1ED39 458 aaKnown RBP18.9■□□□□ 0.62
SKP2-201ENST00000274254 NELFCDQ8IXH7 590 aa18.9■□□□□ 0.62
SKP2-201ENST00000274254 CNTNAP2Q9UHC6 1331 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 TTLL13PA6NNM8 815 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 TSPAN1O60635 241 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 RPS6KA5O75582 802 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 PARNO95453 639 aaKnown RBP18.89■□□□□ 0.61
SKP2-201ENST00000274254 TIMP1P01033 207 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 GHRP10912 638 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 FGFR4P22455 802 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 ITGB8P26012 769 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 ZNF445P59923 1031 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 STIM1Q13586 685 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 TSHZ1Q6ZSZ6 1077 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 DHTKD1Q96HY7 919 aaPredicted RBP18.89■□□□□ 0.61
SKP2-201ENST00000274254 MRPL4Q9BYD3 311 aaKnown RBP18.89■□□□□ 0.61
SKP2-201ENST00000274254 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 PRDM5Q9NQX1 630 aaPredicted RBP18.89■□□□□ 0.61
SKP2-201ENST00000274254 EXOC7Q9UPT5 735 aa18.89■□□□□ 0.61
SKP2-201ENST00000274254 PSMA7O14818 248 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 GPR182O15218 404 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 B4GALT5O43286 388 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 TGFB1I1O43294 461 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 NBNO60934 754 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 ERLIN2O94905 339 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 CCL23P55773 120 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 PRPF4BQ13523 1007 aaKnown RBP18.88■□□□□ 0.61
SKP2-201ENST00000274254 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
SKP2-201ENST00000274254 CENPPQ6IPU0 288 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 ZPBP2Q6X784 338 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 CATSPER4Q7RTX7 472 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 TARS2Q9BW92 718 aaKnown RBP18.88■□□□□ 0.61
SKP2-201ENST00000274254 GBP3Q9H0R5 595 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 SEMA6BQ9H3T3 888 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 ERVK-5Q9HDB9 667 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 ST3GAL5Q9UNP4 418 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 USP20Q9Y2K6 914 aa18.88■□□□□ 0.61
SKP2-201ENST00000274254 TET1Q8NFU7 2136 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 RBAK-RBAKDNI3L0D1 243 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 ARF4P18085 180 aaPredicted RBP18.87■□□□□ 0.61
SKP2-201ENST00000274254 HOXA11P31270 313 aaPredicted RBP18.87■□□□□ 0.61
SKP2-201ENST00000274254 ZCWPW2Q504Y3 356 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 SLC39A4Q6P5W5 647 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 C11orf57Q6ZUT1 292 aaPredicted RBP18.87■□□□□ 0.61
SKP2-201ENST00000274254 SYCP3Q8IZU3 236 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 SCLYQ96I15 445 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 ACO2Q99798 780 aaKnown RBP18.87■□□□□ 0.61
SKP2-201ENST00000274254 PADI3Q9ULW8 664 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 SCN5AQ14524 2016 aa18.87■□□□□ 0.61
SKP2-201ENST00000274254 PDXKO00764 312 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 HNRNPDLO14979 420 aaKnown RBP18.86■□□□□ 0.61
SKP2-201ENST00000274254 CXCL10P02778 98 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 RAG1P15918 1043 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 AXLP30530 894 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 CD52P31358 61 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 SNRPFP62306 86 aaKnown RBP18.86■□□□□ 0.61
SKP2-201ENST00000274254 PAK2Q13177 524 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 KLHL10Q6JEL2 608 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 C7orf61Q8IZ16 206 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 P2RX5Q93086 422 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 BICD1Q96G01 975 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 DNAJC25Q9H1X3 360 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 PTPRHQ9HD43 1115 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 TYW1Q9NV66 732 aaKnown RBP18.86■□□□□ 0.61
SKP2-201ENST00000274254 TRAF3IP3Q9Y228 551 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 TNFSF13BQ9Y275 285 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 STYXL1Q9Y6J8 313 aa18.86■□□□□ 0.61
SKP2-201ENST00000274254 A0A1B0GUA9 196 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 ANKRD63C9JTQ0 380 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 ABLIM1O14639 778 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 EVI5O60447 810 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 PROZP22891 400 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 CCNE1P24864 410 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 ERCC5P28715 1186 aaPredicted RBP18.85■□□□□ 0.61
SKP2-201ENST00000274254 LIG4P49917 911 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 PMS1P54277 932 aaKnown RBP18.85■□□□□ 0.61
SKP2-201ENST00000274254 PAK1Q13153 545 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 ANO6Q4KMQ2 910 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 PLEKHG4Q58EX7 1191 aa18.85■□□□□ 0.61
SKP2-201ENST00000274254 ATF7IP2Q5U623 682 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms