RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 NGRNQ9NPE2 291 aaKnown RBP10.07□□□□□ -0.8
TPM3-201ENST00000271850 NRBP2Q9NSY0 501 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 TBC1D13Q9NVG8 400 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 SPG21Q9NZD8 308 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 DNAJB4Q9UDY4 337 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 WNT7AO00755 349 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 ZBTB39O15060 712 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 HOXA2O43364 376 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 MAFO75444 373 aaPredicted RBP10.06□□□□□ -0.8
TPM3-201ENST00000271850 OFD1O75665 1012 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 CTDNEP1O95476 244 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 BRD1O95696 1058 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 EOMESO95936 686 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 GALTP07902 379 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 EPCAMP16422 314 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
TPM3-201ENST00000271850 TMOD1P28289 359 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 HOXA11P31270 313 aaPredicted RBP10.06□□□□□ -0.8
TPM3-201ENST00000271850 PPM1AP35813 382 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 SPIRE1Q08AE8 756 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 SCRN1Q12765 414 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 STK3Q13188 491 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 UBXN11Q5T124 520 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 MOXD1Q6UVY6 613 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 AGMOQ6ZNB7 445 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 TMC7Q7Z402 723 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 ZNF280BQ86YH2 543 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 RHPN2Q8IUC4 686 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 FBXL6Q8N531 539 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 RDM1Q8NG50 284 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 SLC22A17Q8WUG5 538 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 PHF20Q9BVI0 1012 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 FAM105AQ9NUU6 356 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 SUCLA2Q9P2R7 463 aaPredicted RBP10.06□□□□□ -0.8
TPM3-201ENST00000271850 MYO10Q9HD67 2058 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 PLXNA3P51805 1871 aa10.06□□□□□ -0.8
TPM3-201ENST00000271850 DCHS1Q96JQ0 3298 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 LILRB3O75022 631 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 ZNF623O75123 536 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM3-201ENST00000271850 DDHD2O94830 711 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 DEXIO95424 95 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 EFEMP2O95967 443 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 SLC11A1P49279 550 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 PPP2R5CQ13362 524 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 SMC1AQ14683 1233 aaKnown RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 ABI1Q8IZP0 508 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 VPS52Q8N1B4 723 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 CASP10Q92851 521 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 IGSF21Q96ID5 467 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 NLRP4Q96MN2 994 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 ADAM7Q9H2U9 754 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 DHX33Q9H6R0 707 aaKnown RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 CYP26B1Q9NR63 512 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 CHST12Q9NRB3 414 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 AGPAT5Q9NUQ2 364 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 FAM86C1Q9NVL1 165 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 DDX25Q9UHL0 483 aaKnown RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 TCEAL9Q9UHQ7 104 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 PIN4Q9Y237 131 aaKnown RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 IRAK3Q9Y616 596 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 ZFHX2Q9C0A1 2572 aaPredicted RBP10.05□□□□□ -0.8
TPM3-201ENST00000271850 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 C2orf16Q68DN1 1984 aa10.05□□□□□ -0.8
TPM3-201ENST00000271850 DNAH14Q0VDD8 3507 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 F8W810 466 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 ASGR2P07307 311 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 CTSAP10619 480 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 HOXB8P17481 243 aaPredicted RBP10.04□□□□□ -0.8
TPM3-201ENST00000271850 PSMA5P28066 241 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 PSMC5P62195 406 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 NONOQ15233 471 aaKnown RBP eCLIP10.04□□□□□ -0.81e-7■■■■□ 26.2
TPM3-201ENST00000271850 PTPN14Q15678 1187 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 LETM2Q2VYF4 491 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 RARS2Q5T160 578 aaKnown RBP10.04□□□□□ -0.8
TPM3-201ENST00000271850 TWF2Q6IBS0 349 aaKnown RBP10.04□□□□□ -0.8
TPM3-201ENST00000271850 DDX53Q86TM3 631 aaKnown RBP10.04□□□□□ -0.8
TPM3-201ENST00000271850 ZNF410Q86VK4 478 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 KREMEN2Q8NCW0 462 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 TMEM143Q96AN5 459 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 MRPL9Q9BYD2 267 aaKnown RBP10.04□□□□□ -0.8
TPM3-201ENST00000271850 TM6SF1Q9BZW5 370 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 XPNPEP1Q9NQW7 623 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 DACT1Q9NYF0 836 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 RGL1Q9NZL6 768 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 PUF60Q9UHX1 559 aaKnown RBP10.04□□□□□ -0.8
TPM3-201ENST00000271850 TPCN1Q9ULQ1 816 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
TPM3-201ENST00000271850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.03□□□□□ -0.8
TPM3-201ENST00000271850 FSD2A1L4K1 749 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms