RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 GPBP1Q86WP2 473 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 SRRM1Q8IYB3 904 aaKnown RBP18.49■□□□□ 0.55
LRRC56-201ENST00000270115 CYP4X1Q8N118 509 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 LRMDAQ9H2I8 198 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 SIX2Q9NPC8 291 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 PCMTD2Q9NV79 361 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 COG5Q9UP83 839 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 KIAA1024Q9UPX6 916 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 CBX6O95503 412 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 PRDX5P30044 214 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 MTFR1Q15390 333 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 PARP6Q2NL67 630 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 INTS5Q6P9B9 1019 aaKnown RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 KIFAP3Q92845 792 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 PARP2Q9UGN5 583 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 SEC63Q9UGP8 760 aaKnown RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 CACNA1SQ13698 1873 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 ACADSP16219 412 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 CHRNA3P32297 505 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 EPHA7Q15375 998 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 SGSM1Q2NKQ1 1148 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 CCDC152Q4G0S7 254 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 FOXR2Q6PJQ5 311 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 PTF1AQ7RTS3 328 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 COA7Q96BR5 231 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 ROPN1BQ9BZX4 212 aaPredicted RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 DENND2DQ9H6A0 471 aaPredicted RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 ROPN1Q9HAT0 212 aaPredicted RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 ATP8A2Q9NTI2 1148 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 USP40Q9NVE5 1235 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 CHKBQ9Y259 395 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 DIS3Q9Y2L1 958 aaKnown RBP18.48■□□□□ 0.55
LRRC56-201ENST00000270115 PCDHA3Q9Y5H8 950 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 ALG6Q9Y672 507 aa18.48■□□□□ 0.55
LRRC56-201ENST00000270115 PODXLO00592 558 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 EDIL3O43854 480 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 TNNI2P48788 182 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 CASP4P49662 377 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 ITPK1Q13572 414 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 RCN2Q14257 317 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 FOXB2Q5VYV0 432 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 ARHGAP22Q7Z5H3 698 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 AGGF1Q8N302 714 aaeCLIP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 SPOCK2Q92563 424 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 LRRC37BQ96QE4 947 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 VCXQ9H320 206 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 NMRK1Q9NWW6 199 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 INTUQ9ULD6 942 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 E7ENQ6 273 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 SMAPO00193 183 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 TAC1P20366 129 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 STAT1P42224 750 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 JAM2P57087 298 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 USP4Q13107 963 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 OR52E8Q6IFG1 317 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 PALB2Q86YC2 1186 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 ZNF34Q8IZ26 560 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 ZFAND2BQ8WV99 257 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 FGD4Q96M96 766 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 NT5C3AQ9H0P0 336 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 TAOK3Q9H2K8 898 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 NIP7Q9Y221 180 aaKnown RBP eCLIP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 PITPNM2Q9BZ72 1349 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 NVLO15381 856 aaKnown RBP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 AKAP3O75969 853 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 PLA2G4BP0C869 781 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 RASA1P20936 1047 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 CRKLP46109 303 aaKnown RBP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 DNAJC3Q13217 504 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 CUL3Q13618 768 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 PDIA5Q14554 519 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 CCDC6Q16204 474 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 KYNUQ16719 465 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 RBBP8NLQ8NC74 664 aaPredicted RBP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 ART4Q93070 314 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 MAGEB18Q96M61 343 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 RUNDC3BQ96NL0 473 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 METTL5Q9NRN9 209 aaKnown RBP18.47■□□□□ 0.55
LRRC56-201ENST00000270115 NKIRAS1Q9NYS0 192 aa18.47■□□□□ 0.55
LRRC56-201ENST00000270115 ZNF804BA4D1E1 1349 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 ABLIM1O14639 778 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 TMEM253P0C7T8 217 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 CHKAP35790 457 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 POLGP54098 1239 aaPredicted RBP18.46■□□□□ 0.55
LRRC56-201ENST00000270115 APBB1IPQ7Z5R6 666 aaPredicted RBP18.46■□□□□ 0.55
LRRC56-201ENST00000270115 ZNF444Q8N0Y2 327 aaPredicted RBP18.46■□□□□ 0.55
LRRC56-201ENST00000270115 SERPINB12Q96P63 405 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 POTEB3A0JP26 581 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 POTECB2RU33 542 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 CLIC2O15247 247 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 CALCOCO2Q13137 446 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 POTEBQ6S5H4 581 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 SLC30A5Q8TAD4 765 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 SLC7A6OSQ96CW6 309 aaPredicted RBP18.46■□□□□ 0.55
LRRC56-201ENST00000270115 PWWP2AQ96N64 755 aa18.46■□□□□ 0.55
LRRC56-201ENST00000270115 SCOCQ9UIL1 159 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms