RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PPP1R13LQ8WUF5 828 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 POP1Q99575 1024 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 DLEC1Q9Y238 1755 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 H3BRB1 525 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 H2AFZP0C0S5 128 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 GJA5P36382 358 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 ALKBH5Q6P6C2 394 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 H2AFVQ71UI9 128 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 ATP8B4Q8TF62 1192 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 SLC35C1Q96A29 364 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 ABHD16BQ9H3Z7 469 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 TUT1Q9H6E5 874 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 MYO1AQ9UBC5 1043 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 TRIM10Q9UDY6 481 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 TELO2Q9Y4R8 837 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 M0QZ92 97 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 ZBTB48P10074 688 aaPredicted RBP10.09□□□□□ -0.79
SSR3-201ENST00000265044 INSRRP14616 1297 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 CD19P15391 556 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 KLRC1P26715 233 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 PHKA2P46019 1235 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 EFNA5P52803 228 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 DGKDQ16760 1214 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 ANKRD23Q86SG2 305 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 WDR24Q96S15 920 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 KIAA1586Q9HCI6 787 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 CTTNBP2NLQ9P2B4 639 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 FER1L6Q2WGJ9 1857 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 FRMD3A2A2Y4 597 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 EPHB6O15197 1021 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 TNNC2P02585 160 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 RHOXF2BP0C7M4 288 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 PON1P27169 355 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 KCNJ6P48051 423 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 VAV2P52735 878 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 ACVR2BQ13705 512 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 FAM110CQ1W6H9 321 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 CATSPER4Q7RTX7 472 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 DAW1Q8N136 415 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 CEP112Q8N8E3 955 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 SHCBP1Q8NEM2 672 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 TRIM58Q8NG06 486 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 LMBR1Q8WVP7 490 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 RHOXF2Q9BQY4 288 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 C2orf40Q9H1Z8 148 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 PDE11AQ9HCR9 933 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
SSR3-201ENST00000265044 ANKRD63C9JTQ0 380 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 MOCS3O95396 460 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 NAMPTP43490 491 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 EHHADHQ08426 723 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 ZCWPW2Q504Y3 356 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 KLHDC7AQ5VTJ3 777 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 TMEM161BQ8NDZ6 487 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 ERO1AQ96HE7 468 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 DNAJC7Q99615 494 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 R3HDMLQ9H3Y0 253 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 SYNCQ9H7C4 482 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 VTA1Q9NP79 307 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 PCDHA2Q9Y5H9 948 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 SAR1BQ9Y6B6 198 aa10.09□□□□□ -0.79
SSR3-201ENST00000265044 GSTTP1A0A1W2PQM5 241 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 NKRFO15226 690 aaKnown RBP eCLIP10.08□□□□□ -0.8
SSR3-201ENST00000265044 ZEB2O60315 1214 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ARIH2O95376 493 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ICAM3P32942 547 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 PBX1P40424 430 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 PDE6CP51160 858 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ELF2Q15723 593 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 TRIM65Q6PJ69 517 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 REXO1L1PQ8IX06 675 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 A0A1W2PQJ5 194 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 EIF3CLB5ME19 914 aaKnown RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 CD58P19256 250 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 NFX1Q12986 1120 aaKnown RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 ERCC6LQ2NKX8 1250 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 APBB1IPQ7Z5R6 666 aaPredicted RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 RNF169Q8NCN4 708 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ZBTB45Q96K62 511 aaPredicted RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 EIF3CQ99613 913 aaKnown RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 RPF1Q9H9Y2 349 aaKnown RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 APEX2Q9UBZ4 518 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 VTNP04004 478 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 MAPTP10636 758 aaKnown RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 RGS2P41220 211 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ZNF131P52739 623 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 NLRP11P59045 1033 aaKnown RBP10.08□□□□□ -0.8
SSR3-201ENST00000265044 GTF2BQ00403 316 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 FIGNQ5HY92 759 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 GNASQ5JWF2 1037 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 GPAT2Q6NUI2 795 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 ASAP3Q8TDY4 903 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
SSR3-201ENST00000265044 GOLGA1Q92805 767 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms