RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HAUS3Q68CZ6 603 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 PADI6Q6TGC4 694 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 MAEAQ7L5Y9 396 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 IGSF22Q8N9C0 903 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 NRDE2Q9H7Z3 1164 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 NGRNQ9NPE2 291 aaKnown RBP17.84■□□□□ 0.45
USE1-201ENST00000263897 GPRC5CQ9NQ84 441 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.84■□□□□ 0.45
USE1-201ENST00000263897 CLEC1BQ9P126 229 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 INPP5FQ9Y2H2 1132 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 STK24Q9Y6E0 443 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 CNTNAP2Q9UHC6 1331 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 CARNS1A5YM72 827 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 NT5C1B-RDH14C9J2C7 533 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
USE1-201ENST00000263897 NDUFV1P49821 464 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 RNASELQ05823 741 aaKnown RBP17.83■□□□□ 0.44
USE1-201ENST00000263897 CLUL1Q15846 466 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 ECM1Q16610 540 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 AMHR2Q16671 573 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 NOTUMQ6P988 496 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 TMC7Q7Z402 723 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 SMG8Q8ND04 991 aaKnown RBP17.83■□□□□ 0.44
USE1-201ENST00000263897 CCDC51Q96ER9 411 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 MSLNLQ96KJ4 702 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 CDCA3Q99618 268 aaPredicted RBP17.83■□□□□ 0.44
USE1-201ENST00000263897 TCF25Q9BQ70 676 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 RAB34Q9BZG1 259 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 RSAD1Q9HA92 442 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 KANSL3Q9P2N6 904 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 CD207Q9UJ71 328 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
USE1-201ENST00000263897 ARHGEF35A5YM69 484 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 H3BQV1 296 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 MBTPS2O43462 519 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 ZC3H11AO75152 810 aaKnown RBP eCLIP17.82■□□□□ 0.44
USE1-201ENST00000263897 GLP2RO95838 553 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 GALTP07902 379 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 ITGA4P13612 1032 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 ARF4P18085 180 aaPredicted RBP17.82■□□□□ 0.44
USE1-201ENST00000263897 PRPHP41219 470 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 SMAD2Q15796 467 aaKnown RBP17.82■□□□□ 0.44
USE1-201ENST00000263897 IL17AQ16552 155 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 DUSP6Q16828 381 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 PLPP4Q5VZY2 271 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 GJD3Q8N144 294 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 URGCPQ8TCY9 931 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 EIF2AQ9BY44 585 aaKnown RBP17.82■□□□□ 0.44
USE1-201ENST00000263897 UBN1Q9NPG3 1134 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 ENTPD7Q9NQZ7 604 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 PRKAG3Q9UGI9 489 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 KIAA1024Q9UPX6 916 aa17.82■□□□□ 0.44
USE1-201ENST00000263897 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
USE1-201ENST00000263897 A0A1B0GUA9 196 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 FSD2A1L4K1 749 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 LRRIQ4A6NIV6 560 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 HIDE1A8MVS5 230 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 EYA4O95677 639 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 AFF1P51825 1210 aaKnown RBP17.81■□□□□ 0.44
USE1-201ENST00000263897 COASYQ13057 564 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
USE1-201ENST00000263897 DTHD1Q6ZMT9 781 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 MRPL43Q8N983 215 aaKnown RBP17.81■□□□□ 0.44
USE1-201ENST00000263897 TMEM169Q96HH4 297 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 IGSF21Q96ID5 467 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 BHMT2Q9H2M3 363 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 RNF39Q9H2S5 420 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 DNAJB4Q9UDY4 337 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 IPPQ9Y573 584 aa17.81■□□□□ 0.44
USE1-201ENST00000263897 B4GALT5O43286 388 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 DDHD2O94830 711 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 SMAD4Q13485 552 aaKnown RBP17.8■□□□□ 0.44
USE1-201ENST00000263897 KCNC3Q14003 757 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 CDCA2Q69YH5 1023 aaPredicted RBP17.8■□□□□ 0.44
USE1-201ENST00000263897 TMEM184AQ6ZMB5 413 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 DDX53Q86TM3 631 aaKnown RBP17.8■□□□□ 0.44
USE1-201ENST00000263897 VN1R2Q8NFZ6 395 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 SNX29Q8TEQ0 813 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 GBP3Q9H0R5 595 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 FZD8Q9H461 694 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 DDX19AQ9NUU7 478 aaKnown RBP17.8■□□□□ 0.44
USE1-201ENST00000263897 BARX2Q9UMQ3 279 aaPredicted RBP17.8■□□□□ 0.44
USE1-201ENST00000263897 HES2Q9Y543 173 aa17.8■□□□□ 0.44
USE1-201ENST00000263897 C2orf71A6NGG8 1288 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 INPPL1O15357 1258 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 B4GALT3O60512 393 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 CXCL14O95715 111 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 POMCP01189 267 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 ALDH2P05091 517 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 CDC25AP30304 524 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 SLC11A1P49279 550 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 SMC1AQ14683 1233 aaKnown RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 FAM187BQ17R55 369 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms