RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CHMP6Q96FZ7 201 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 C1orf112Q9NSG2 853 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 SPAG7O75391 227 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 TM4SF1P30408 202 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 NSFP46459 744 aaKnown RBP17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 DCAF4Q8WV16 495 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 INPP4AQ96PE3 977 aaPredicted RBP17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 MYH13Q9UKX3 1938 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 OSTNP61366 133 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 IFI35P80217 286 aaPredicted RBP17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 RNF207Q6ZRF8 634 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 NLRX1Q86UT6 975 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 CPA5Q8WXQ8 436 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 ARHGEF2Q92974 986 aaKnown RBP17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 CAVIN3Q969G5 261 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 ACCSQ96QU6 501 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 ANAPC5Q9UJX4 755 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 M0R2N6 131 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 PLSCR1O15162 318 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 KRT19P08727 400 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 CEP55Q53EZ4 464 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 DHX38Q92620 1227 aaKnown RBP17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 TMBIM4Q9HC24 238 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 SHBGP04278 402 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 SETDB1Q15047 1291 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 KYNUQ16719 465 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 DAB2IPQ5VWQ8 1189 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 FAM213AQ9BRX8 229 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 STK33Q9BYT3 514 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 KMT5AQ9NQR1 393 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 AGPAT3Q9NRZ7 376 aa17.38■□□□□ 0.37
PDZRN3-201ENST00000263666 FOXO6A8MYZ6 492 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 PJA2O43164 708 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 LIG4P49917 911 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 ORC2Q13416 577 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 SMAD1Q15797 465 aaKnown RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 HHATQ5VTY9 493 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 DCAF15Q66K64 600 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 EEPD1Q7L9B9 569 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 SPATS2Q86XZ4 545 aaKnown RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 PALB2Q86YC2 1186 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 SLITRK6Q9H5Y7 841 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 SLC40A1Q9NP59 571 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 TOPORSQ9NS56 1045 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 ROBO1Q9Y6N7 1651 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 MYO3BQ8WXR4 1341 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 H0Y3Z8 333 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 SGPL1O95470 568 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 MFAP3P55082 362 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 BFSP1Q12934 665 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 MTERF2Q49AM1 385 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 ACSF2Q96CM8 615 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 AGBL1Q96MI9 1066 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 ERP44Q9BS26 406 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 GDF3Q9NR23 364 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 AJAP1Q9UKB5 411 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 GINS2Q9Y248 185 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 TCP11X1B4DZS4 312 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 DMP1Q13316 513 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 XPO6Q96QU8 1125 aaKnown RBP17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 GANQ9H2C0 597 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 AIPL1Q9NZN9 384 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 PCDHB4Q9Y5E5 795 aa17.37■□□□□ 0.37
PDZRN3-201ENST00000263666 RWDD2BP57060 319 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 SEMA3FQ13275 785 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 SCARA5Q6ZMJ2 495 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 HAUS6Q7Z4H7 955 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 LRRC34Q8IZ02 419 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 KAT2BQ92831 832 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 FGFR1OP2Q9NVK5 253 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 CSADQ9Y600 493 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 F8VZ95 297 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 DLG4P78352 724 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 RSRC1Q96IZ7 334 aaKnown RBP17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 IFT74Q96LB3 600 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 ALG13Q9NP73 1137 aaKnown RBP17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 KLHL14Q9P2G3 628 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 SLC12A3P55017 1021 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 IRF2BP2Q7Z5L9 587 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 PARP2Q9UGN5 583 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 PCDHGC5Q9Y5F6 944 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 DENND3A2RUS2 1198 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 BRAFP15056 766 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 HNRNPH3P31942 346 aaKnown RBP17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 STRIP1Q5VSL9 837 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 RHOT2Q8IXI1 618 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 IQCKQ8N0W5 287 aa17.36■□□□□ 0.37
PDZRN3-201ENST00000263666 PIK3CAP42336 1068 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 KRT17Q04695 432 aa17.35■□□□□ 0.37
PDZRN3-201ENST00000263666 QPCTQ16769 361 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms