RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 SFI1A8K8P3 1242 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 K7ENM7 598 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 DRP2Q13474 957 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 POSTNQ15063 836 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 CNNM4Q6P4Q7 775 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 HAUS6Q7Z4H7 955 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 FAM228AQ86W67 206 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 HERC6Q8IVU3 1022 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 TOP1MTQ969P6 601 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 AGO3Q9H9G7 860 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 AGPAT5Q9NUQ2 364 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 KBTBD4Q9NVX7 518 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 PCDHA11Q9Y5I1 949 aa13.8□□□□□ -0.2
CLNS1A-201ENST00000263309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 A0A0U1RQF3 1178 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 SLC16A4O15374 487 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 GCNT3O95395 438 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 ITGA4P13612 1032 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 LIG4P49917 911 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 NDUFA8P51970 172 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 DCAF4L1Q3SXM0 396 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 ATF7IP2Q5U623 682 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 GPR153Q6NV75 609 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 TRAF7Q6Q0C0 670 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 GLB1LQ6UWU2 654 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 C16orf59Q7L2K0 433 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 KCNK18Q7Z418 384 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 FIBCD1Q8N539 461 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 ACCSQ96QU6 501 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 FZD8Q9H461 694 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 TOPORSQ9NS56 1045 aaPredicted RBP13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 SERTAD1Q9UHV2 236 aa13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
CLNS1A-201ENST00000263309 CLDN3O15551 220 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 LDHAP00338 332 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 MBTD1Q05BQ5 628 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 STIM1Q13586 685 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 MBTPS1Q14703 1052 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 ARSHQ5FYA8 562 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 C9orf50Q5SZB4 431 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 L1TD1Q5T7N2 865 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 ZPBP2Q6X784 338 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 KRBA2Q6ZNG9 492 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 PAGE5Q96GU1 130 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 TRAIPQ9BWF2 469 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 R3HCC1Q9Y3T6 440 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
CLNS1A-201ENST00000263309 TMEM265A0A087WTH1 108 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 FAM237AA0A1B0GTK4 181 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 MYMKA6NI61 221 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 HNRNPDLO14979 420 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 ZNF623O75123 536 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 CSDE1O75534 798 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 GJB5O95377 273 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 PPP1R2P41236 205 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 ZNF131P52739 623 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 EPHB4P54760 987 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 ZNF697Q5TEC3 545 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 HS2ST1Q7LGA3 356 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 GOLGA5Q8TBA6 731 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 SMARCE1Q969G3 411 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 ST6GALNAC4Q9H4F1 302 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 OLFML3Q9NRN5 406 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 STK39Q9UEW8 545 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 TBX20Q9UMR3 447 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 HPSEQ9Y251 543 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 PCDHB2Q9Y5E7 798 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 PCDHB12Q9Y5F1 795 aa13.77□□□□□ -0.21
CLNS1A-201ENST00000263309 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
CLNS1A-201ENST00000263309 KIAA0391O15091 583 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms