RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ITGB1BP2Q9UKP3 347 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 ZNF148Q9UQR1 794 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 ASTN2O75129 1339 aaPredicted RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 KCNJ18B7U540 433 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 GLI1P08151 1106 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 ACADSP16219 412 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 TARSP26639 723 aaKnown RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 ARL1P40616 181 aaPredicted RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 COPB1P53618 953 aaKnown RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 KCNJ12Q14500 433 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 KPNB1Q14974 876 aaKnown RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 UBE3CQ15386 1083 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 LETM2Q2VYF4 491 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 LACTB2Q53H82 288 aaPredicted RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 TBC1D10CQ8IV04 446 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 PEX5LQ8IYB4 626 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 ANKRD27Q96NW4 1050 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 AP1M1Q9BXS5 423 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 DEFB129Q9H1M3 183 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 TMBIM4Q9HC24 238 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 TUBGCP4Q9UGJ1 667 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 CEP290O15078 2479 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ANO9A1A5B4 782 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 TMEM247A6NEH6 219 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ADM5C9JUS6 153 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 LMNAP02545 664 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 ATP6V1B1P15313 513 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MCM7P33993 719 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 HSD17B3P37058 310 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 CDK8P49336 464 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 SARSP49591 514 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 ZNF268Q14587 947 aaPredicted RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 NR1I3Q14994 352 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 C6orf89Q6UWU4 347 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ZFPM1Q8IX07 1006 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ERP27Q96DN0 273 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 TMEM237Q96Q45 408 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 XAB2Q9HCS7 855 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 AASDHPPTQ9NRN7 309 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ZMYND8Q9ULU4 1186 aaPredicted RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 SCINQ9Y6U3 715 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ATRNO75882 1429 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ENTPD5O75356 428 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 APOEP02649 317 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 CASP1P29466 404 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 CNPY1Q3B7I2 92 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MRRFQ96E11 262 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 BLZF1Q9H2G9 400 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 NHEJ1Q9H9Q4 299 aaPredicted RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 FAM207AQ9NSI2 230 aaPredicted RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 HACL1Q9UJ83 578 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MOSPD1Q9UJG1 213 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 HAO1Q9UJM8 370 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 COMMD3-BMI1R4GMX3 469 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 KIAA0100Q14667 2235 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 KRIT1O00522 736 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MCF2LO15068 1137 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 GRIN3BO60391 1043 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 FGFR1OPO95684 399 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 NCALDP61601 193 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 PSMC1P62191 440 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 MRPS9P82933 396 aaKnown RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 NBPF12Q5TAG4 269 aaPredicted RBP8.95□□□□□ -0.98
LDB3-201ENST00000263066 SLFN13Q68D06 897 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 TMC4Q7Z404 712 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ZNF654Q8IZM8 581 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MMGT1Q8N4V1 131 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 COA7Q96BR5 231 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 LRRC37BQ96QE4 947 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 AZI2Q9H6S1 392 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 MYOZ2Q9NPC6 264 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 POLR3EQ9NVU0 708 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 ARL2BPQ9Y2Y0 163 aa8.95□□□□□ -0.98
LDB3-201ENST00000263066 COL4A1P02462 1669 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 TTC26A0AVF1 554 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 TTLL13PA6NNM8 815 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 CELF2O95319 508 aaKnown RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 ITGA2BP08514 1039 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 TAL1P17542 331 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 PMS2P54278 862 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 DCTN2Q13561 401 aaKnown RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 KRT31Q15323 416 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 ZNF174Q15697 407 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 CCDC62Q6P9F0 684 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 RSBN1LQ6PCB5 846 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.94□□□□□ -0.98
LDB3-201ENST00000263066 TMEM98Q9Y2Y6 226 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 CACNA1FO60840 1977 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 NRAPQ86VF7 1730 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 KLRF2D3W0D1 207 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 F8VZ95 297 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 ABLIM1O14639 778 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 SLC26A4O43511 780 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 CSPG5O95196 566 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 AKR1B1P15121 316 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 DRD4P21917 467 aa8.94□□□□□ -0.98
LDB3-201ENST00000263066 CDC27P30260 824 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms