RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 LMBR1Q8WVP7 490 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 BSNDQ8WZ55 320 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 GPR88Q9GZN0 384 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 SPON1Q9HCB6 807 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 UBE2TQ9NPD8 197 aaPredicted RBP14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 PDLIM7Q9NR12 457 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 KCNG1Q9UIX4 513 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 L1RE1Q9UN81 338 aa14.04□□□□□ -0.16
SPTLC1-201ENST00000262554 GOLGA8IPA6NC78 632 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 GOLGA8JA6NMD2 632 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 ANKRD63C9JTQ0 380 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 MXI1P50539 228 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 ALDH5A1P51649 535 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 MCCD1P59942 119 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 CNTN2Q02246 1040 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 KIF22Q14807 665 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 C1orf220Q5T0J3 134 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 DLK2Q6UY11 383 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 CYFIP1Q7L576 1253 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 ZSWIM2Q8NEG5 633 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 LNX1Q8TBB1 728 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 RUBCNQ92622 972 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 TAF4BQ92750 862 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 RNF181Q9P0P0 153 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 BTBD7Q9P203 1132 aa14.03□□□□□ -0.16
SPTLC1-201ENST00000262554 ADRB2P07550 413 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 TNFAIP3P21580 790 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 ADSSP30520 456 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 SP2Q02086 613 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 GPS2Q13227 327 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 MTERF2Q49AM1 385 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 SEPT14Q6ZU15 432 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 USP37Q86T82 979 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 GLYCTKQ8IVS8 523 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 PLEKHO2Q8TD55 490 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 POLR3FQ9H1D9 316 aaPredicted RBP14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 PRDM10Q9NQV6 1147 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 ZNF302Q9NR11 478 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 TELO2Q9Y4R8 837 aa14.02□□□□□ -0.16
SPTLC1-201ENST00000262554 A0A0G2JLL6 359 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 ATG7O95352 703 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 NF2P35240 595 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 POLGP54098 1239 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SOX10P56693 466 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 PPATQ06203 517 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SMC1AQ14683 1233 aaKnown RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 RPS6KA1Q15418 735 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 BRDTQ58F21 947 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 PRRT2Q7Z6L0 340 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 NCAPG2Q86XI2 1143 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 CBWD2Q8IUF1 395 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 MSL3Q8N5Y2 521 aaKnown RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 TMC2Q8TDI7 906 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 POMGNT1Q8WZA1 660 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SAAL1Q96ER3 474 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 BICD1Q96G01 975 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SYT11Q9BT88 431 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 ELP3Q9H9T3 547 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 XPNPEP1Q9NQW7 623 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 USP20Q9Y2K6 914 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 MAFBQ9Y5Q3 323 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 CES2O00748 559 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 HNRNPDLO14979 420 aaKnown RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 LRRN2O75325 713 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 OATP04181 439 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 MATR3P43243 847 aaKnown RBP eCLIP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 DNA2P51530 1060 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 GALCP54803 685 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 EMC2Q15006 297 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 KRT39Q6A163 491 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 ERO1BQ86YB8 467 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 ARHGEF19Q8IW93 802 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 SYCE1Q8N0S2 351 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 LRRC57Q8N9N7 239 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 TPCN2Q8NHX9 752 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 FBXL18Q96ME1 805 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 UBXN6Q9BZV1 441 aa14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-201ENST00000262554 TULP1O00294 542 aaPredicted RBP14□□□□□ -0.17
SPTLC1-201ENST00000262554 IRF6O14896 467 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 TMEM253P0C7T8 217 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 GARTP22102 1010 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 SCP2P22307 547 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 MAP2K1Q02750 393 aaPredicted RBP14□□□□□ -0.17
SPTLC1-201ENST00000262554 FSTL1Q12841 308 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 CASP8Q14790 479 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 SLC39A4Q6P5W5 647 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 DNAAF5Q86Y56 855 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 OLIG1Q8TAK6 271 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 PARD3BQ8TEW8 1205 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.17
SPTLC1-201ENST00000262554 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms